Resource

Id Histone_ChIP-seq/ENCSR285PDUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR285PDU [biosample_summary="Homo sapiens BLaER1 24 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR285PDU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 24 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:08.746663+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR285PDU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 24 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR285PDU float

Histone_ChIP-seq_ENCSR285PDU
Histone_ChIP-seq ENCSR285PDU [biosample_summary="Homo sapiens BLaER1 24 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR285PDU [1.15, 33]
n
104,143,092
mean
7.55
sd
5.35

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1041430923.24% 68180
chr1 2875495 1.16% 1993
chr1_KI270708v1_random 377 0.30% 1
chr1_KI270709v1_random 933 1.40% 2
chr1_KI270712v1_random 24683 14.02% 20
chr1_KI270713v1_random 8749 21.47% 7
chr1_KI270714v1_random 5053 12.11% 10
chr2 2279936 0.94% 1503
chr3 1257438 0.63% 937
chr4 921308 0.48% 696
chr5 1338532 0.74% 867
chr6 1604296 0.94% 1041
chr7 1373184 0.86% 902
chr8 1356462 0.93% 1008
chr9 1216281 0.88% 849
chr9_KI270717v1_random 677 1.69% 2
chr10 1463818 1.09% 1013
chr11 1537584 1.14% 1007
chr12 1510706 1.13% 847
chr13 639054 0.56% 411
chr14 785453 0.73% 516
chr15 1039709 1.02% 680
chr16 1091103 1.21% 774
chr16_KI270728v1_random 507 0.03% 1
chr17 1970082 2.37% 1254
chr17_KI270729v1_random 258 0.09% 1
chr18 388894 0.48% 337
chr19 1218509 2.08% 853
chr20 864859 1.34% 594
chr21 320616 0.69% 264
chr22 747996 1.47% 513
chr22_KI270733v1_random 3684 2.05% 5
chr22_KI270738v1_random 827 0.83% 3
chrUn_GL000216v2 502 0.28% 2
chrUn_GL000219v1 369 0.21% 1
chrUn_GL000220v1 1432 0.89% 2
chrUn_KI270438v1 3742 3.33% 7
chrUn_KI270507v1 265 4.95% 1
chrUn_KI270744v1 4172 2.48% 7
chrUn_KI270747v1 272 0.14% 1
chrX 76283962 48.89% 49243
chrY 1313 <0.01% 5
3325 contigs with no values (125148558 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 68180 250 87291 1527.47 673
global segment-length histogram

Files

Filename Size md5
ENCFF638LQO.bed.gz 1.33 MB 4b99685618a66d60208062237ea5f1d1
ENCFF638LQO.tabix.bed.gz 665.05 KB 521c7e543c8b9c1938fae65d3558c613
ENCFF638LQO.tabix.bed.gz.tbi 104.46 KB 1b983ddb9f4ea06feb42a0b54f1faeee
genomic_resource.yaml 3.12 KB f2df25c93a382cd3a640bdbb6b5f9445
statistics/