Resource
| Id | Histone_ChIP-seq/ENCSR285NFQ |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR285NFQ [biosample_summary="Homo sapiens BLaER1 36 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27ac"] |
| Description |
status: released biological_replicates: Rep 1 summary: 36 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1 output_type: peaks audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-joint-replicate-peak-calling-step-v-1|/analysis-steps/crg-chip-seq-joint-replicate-peak-calling-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-alignment-and-filtering-step-v-1|/analysis-steps/crg-chip-seq-alignment-and-filtering-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-bed-to-bigbed-conversion-step-v-1|/analysis-steps/crg-chip-seq-bed-to-bigbed-conversion-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} audit_internal_action: Released analysis step version {crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0|/analysis-step-versions/crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR285NFQ | float |
Histone_ChIP-seq_ENCSR285NFQ |
Histone_ChIP-seq ENCSR285NFQ [biosample_summary="Homo sapiens BLaER1 36 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27ac"]
|
 |
[1.35, 82.3] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 108101023 | 3.36% | 100575 |
| chr1 | 10439766 | 4.19% | 9539 |
| chr1_KI270713v1_random | 1981 | 4.86% | 5 |
| chr1_KI270714v1_random | 580 | 1.39% | 2 |
| chr2 | 7793756 | 3.22% | 7493 |
| chr3 | 5873169 | 2.96% | 5665 |
| chr3_GL000221v1_random | 569 | 0.37% | 1 |
| chr4 | 3789046 | 1.99% | 3732 |
| chr5 | 5282857 | 2.91% | 4929 |
| chr6 | 5532714 | 3.24% | 5037 |
| chr7 | 5112040 | 3.21% | 4942 |
| chr8 | 4641657 | 3.20% | 4497 |
| chr9 | 4508578 | 3.26% | 4307 |
| chr9_KI270718v1_random | 1417 | 3.72% | 4 |
| chr9_KI270719v1_random | 497 | 0.28% | 1 |
| chr10 | 5176739 | 3.87% | 4792 |
| chr11 | 5257648 | 3.89% | 4858 |
| chr11_KI270721v1_random | 682 | 0.68% | 2 |
| chr12 | 5539548 | 4.16% | 4953 |
| chr13 | 2249166 | 1.97% | 2160 |
| chr14 | 3405397 | 3.18% | 3138 |
| chr14_GL000009v2_random | 434 | 0.22% | 1 |
| chr14_GL000194v1_random | 901 | 0.47% | 1 |
| chr14_KI270723v1_random | 620 | 1.63% | 1 |
| chr15 | 3467115 | 3.40% | 3301 |
| chr16 | 4920561 | 5.45% | 4607 |
| chr16_KI270728v1_random | 1095 | 0.06% | 2 |
| chr17 | 6575459 | 7.90% | 5736 |
| chr17_GL000205v2_random | 11714 | 6.31% | 7 |
| chr18 | 1966400 | 2.45% | 1918 |
| chr19 | 6094558 | 10.40% | 5277 |
| chr20 | 3534247 | 5.48% | 3279 |
| chr21 | 1374912 | 2.94% | 1291 |
| chr22 | 2890425 | 5.69% | 2773 |
| chr22_KI270731v1_random | 545 | 0.36% | 2 |
| chr22_KI270733v1_random | 1999 | 1.11% | 3 |
| chrUn_GL000195v1 | 2953 | 1.61% | 5 |
| chrUn_GL000219v1 | 4053 | 2.26% | 3 |
| chrUn_GL000220v1 | 267 | 0.17% | 1 |
| chrUn_GL000224v1 | 1416 | 0.79% | 4 |
| chrUn_KI270438v1 | 274 | 0.24% | 1 |
| chrUn_KI270744v1 | 5026 | 2.98% | 4 |
| chrUn_KI270753v1 | 2245 | 3.57% | 3 |
| chrUn_KI270755v1 | 250 | 0.68% | 1 |
| chrX | 2634789 | 1.69% | 2295 |
| chrY | 958 | <0.01% | 2 |
| 3321 contigs with no values (124619609 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 100575 | 250 | 34724 | 1074.83 | 544 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF375AOM.bed.gz | 2.24 MB | d345dce560a3de324a7c3312ea8c4502 |
| ENCFF375AOM.tabix.bed.gz | 1.03 MB | 9416023234437725c8622c2786c05e2f |
| ENCFF375AOM.tabix.bed.gz.tbi | 272.54 KB | 64af516e338a44dfc2e7c58e00e51942 |
| genomic_resource.yaml | 3.12 KB | 9ce8b80fc8a39f9ae5ccabf0d95ed18a |
| statistics/ |