Resource

Id Histone_ChIP-seq/ENCSR281JXCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR281JXC [biosample_summary="Homo sapiens heart tissue embryo (101 days)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR281JXC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000948/
  • biosample_summary: Homo sapiens heart tissue embryo (101 days)
  • date_created: 2015-09-15T19:51:50.244178+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR281JXC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: embryo (101 days)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR281JXC float

Histone_ChIP-seq_ENCSR281JXC
Histone_ChIP-seq ENCSR281JXC [biosample_summary="Homo sapiens heart tissue embryo (101 days)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR281JXC [2.05, 23.2]
n
13,325,717
mean
6.5
sd
2.94

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 133257170.41% 35669
chr1 1321626 0.53% 3784
chr2 1156053 0.48% 2955
chr3 562240 0.28% 1399
chr4 522927 0.27% 1297
chr5 924532 0.51% 2316
chr6 1194238 0.70% 2716
chr7 653441 0.41% 1485
chr8 541246 0.37% 1471
chr9 542925 0.39% 1444
chr10 729621 0.55% 1958
chr11 669839 0.50% 1969
chr12 632904 0.47% 1726
chr13 347510 0.30% 822
chr14 580619 0.54% 1438
chr15 519707 0.51% 1460
chr16 295703 0.33% 930
chr17 657649 0.79% 1894
chr18 231707 0.29% 671
chr19 341242 0.58% 1111
chr20 426106 0.66% 1247
chr21 156588 0.34% 444
chr22 184787 0.36% 712
chrX 130490 0.08% 412
chrY 2017 <0.01% 8
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 35669 140 7711 373.59 240
global segment-length histogram

Files

Filename Size md5
ENCFF694UZE.bed.gz 597.41 KB 1d85c083c3cf0ee41496fc88c3e9552e
ENCFF694UZE.tabix.bed.gz 321.04 KB cb16139be0687ab5837de9d5a90c03b1
ENCFF694UZE.tabix.bed.gz.tbi 98.02 KB b936d4d91790d73e825c9391629d3b96
genomic_resource.yaml 1.95 KB 83f0eeb1715d9d66c202d721c3941405
statistics/