Resource

Id Histone_ChIP-seq/ENCSR279KIXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR279KIX [biosample_summary="Homo sapiens C4-2B" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR279KIX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0006365/
  • biosample_summary: Homo sapiens C4-2B
  • date_created: 2017-03-02T19:26:28.501447+00:00
  • date_released: 2017-03-16
  • doi: 10.17989/ENCSR279KIX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR279KIX float

Histone_ChIP-seq_ENCSR279KIX
Histone_ChIP-seq ENCSR279KIX [biosample_summary="Homo sapiens C4-2B" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR279KIX [1.35, 82.1]
n
74,899,469
mean
14.3
sd
11.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 748994692.33% 58902
chr1 7396599 2.97% 5636
chr1_KI270706v1_random 1012 0.58% 1
chr1_KI270711v1_random 803 1.90% 1
chr1_KI270713v1_random 1894 4.65% 2
chr2 5222643 2.16% 4464
chr3 4389362 2.21% 3858
chr4 2800467 1.47% 2622
chr4_GL000008v2_random 551 0.26% 1
chr5 3575919 1.97% 3138
chr6 3891050 2.28% 3394
chr7 3453605 2.17% 2994
chr8 3273475 2.26% 2757
chr9 3095783 2.24% 2360
chr9_KI270718v1_random 548 1.44% 1
chr9_KI270719v1_random 1177 0.67% 1
chr10 3479153 2.60% 2884
chr11 3964281 2.93% 2900
chr12 3536908 2.65% 2907
chr13 1634799 1.43% 1508
chr14 2401585 2.24% 1916
chr14_GL000009v2_random 1162 0.58% 1
chr14_GL000194v1_random 795 0.42% 1
chr14_GL000225v1_random 1556 0.74% 2
chr14_KI270722v1_random 2105 1.08% 2
chr14_KI270723v1_random 618 1.62% 1
chr14_KI270724v1_random 429 1.08% 1
chr14_KI270726v1_random 603 1.38% 1
chr15 2866228 2.81% 2234
chr15_KI270727v1_random 1265 0.28% 2
chr16 3211494 3.55% 1944
chr16_KI270728v1_random 379 0.02% 1
chr17 4287915 5.15% 2672
chr17_GL000205v2_random 3060 1.65% 5
chr18 1449731 1.80% 1331
chr19 3674556 6.27% 1998
chr20 2117014 3.29% 1508
chr21 973537 2.08% 821
chr22 2117868 4.17% 1240
chr22_KI270732v1_random 1644 3.96% 2
chr22_KI270733v1_random 1811 1.01% 2
chr22_KI270734v1_random 499 0.30% 1
chr22_KI270736v1_random 1904 1.05% 4
chrUn_GL000195v1 5306 2.90% 7
chrUn_GL000218v1 1869 1.16% 2
chrUn_GL000219v1 1573 0.88% 1
chrUn_GL000220v1 1099 0.68% 2
chrUn_KI270743v1 3138 1.49% 4
chrUn_KI270744v1 1075 0.64% 2
chrUn_KI270751v1 713 0.47% 1
chrX 2045176 1.31% 1761
chrY 1733 <0.01% 3
3315 contigs with no values (123184859 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 58902 315 26008 1271.59 870
global segment-length histogram

Files

Filename Size md5
ENCFF588AEO.bed.gz 1.63 MB d576d3d0f053a572e2a876a40ad95782
ENCFF588AEO.tabix.bed.gz 680.55 KB 7f82f2e8414aa966ba8fa6af7ecf610a
ENCFF588AEO.tabix.bed.gz.tbi 246.43 KB eeb3882a6eed0e5eb89ce4109ce75452
genomic_resource.yaml 1.36 KB 9ed8efdec18725e94555cc3aecb43b8e
statistics/