Resource

Id Histone_ChIP-seq/ENCSR278JAHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR278JAH [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (79 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR278JAH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (79 years)
  • date_created: 2021-04-30T04:18:01.156003+00:00
  • date_released: 2022-01-06
  • doi: 10.17989/ENCSR278JAH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (79 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR278JAH float

Histone_ChIP-seq_ENCSR278JAH
Histone_ChIP-seq ENCSR278JAH [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (79 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR278JAH [1.93, 50.7]
n
93,215,293
mean
8.96
sd
5.76

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 932152932.90% 86921
chr1 9335502 3.75% 8414
chr2 6829868 2.82% 6582
chr3 5826824 2.94% 5564
chr4 3807825 2.00% 3727
chr5 5192647 2.86% 4977
chr6 4885516 2.86% 4592
chr7 4210928 2.64% 4288
chr8 3777628 2.60% 3533
chr9 4570402 3.30% 4098
chr10 4794405 3.58% 4254
chr11 5724197 4.24% 5123
chr12 4820981 3.62% 4649
chr13 2212406 1.93% 2097
chr14 3223280 3.01% 2865
chr15 3200158 3.14% 3021
chr16 3134554 3.47% 2883
chr17 5082828 6.10% 4497
chr18 1866101 2.32% 1775
chr19 3708679 6.33% 3406
chr20 2652137 4.12% 2430
chr21 963708 2.06% 870
chr22 2187022 4.30% 1950
chrX 1207697 0.77% 1326
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 86921 170 40253 1072.41 675
global segment-length histogram

Files

Filename Size md5
ENCFF289MDK.bed.gz 1.78 MB 2d8e7b671461c10d1f93c20138771889
ENCFF289MDK.tabix.bed.gz 882.69 KB 609247d4e346039a7f8c8b524bf50278
ENCFF289MDK.tabix.bed.gz.tbi 255.02 KB 1179f08999bb1c37cddfbf7125cb78be
genomic_resource.yaml 1.57 KB 361cdadd5f10dd4efd3c96412bc9e99f
statistics/