Resource

Id Histone_ChIP-seq/ENCSR277WTOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR277WTO [biosample_summary="Homo sapiens T-cell" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR277WTO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000084/
  • biosample_summary: Homo sapiens T-cell
  • date_created: 2015-09-15T19:47:07.656853+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR277WTO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: anisogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment: Experiment 39b247e5-c192-4ff2-89ac-f40f24639bb0 merged into base.
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR277WTO float

Histone_ChIP-seq_ENCSR277WTO

Histone_ChIP-seq ENCSR277WTO [biosample_summary="Homo sapiens T-cell" and target="H3K27me3"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR277WTO [2.31, 9.12]
n
7,705,174
mean
4.16
sd
0.979

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 77051740.24% 24238
chr1 725404 0.29% 2333
chr2 597657 0.25% 1828
chr3 320537 0.16% 1008
chr4 362229 0.19% 1048
chr5 528137 0.29% 1588
chr6 683873 0.40% 2002
chr7 363942 0.23% 1124
chr8 349793 0.24% 1075
chr9 328825 0.24% 1081
chr10 408355 0.31% 1294
chr11 414548 0.31% 1332
chr12 376323 0.28% 1149
chr13 211894 0.19% 623
chr14 274310 0.26% 883
chr15 340082 0.33% 1079
chr16 200759 0.22% 672
chr17 289910 0.35% 967
chr18 172449 0.21% 546
chr19 229524 0.39% 789
chr20 263788 0.41% 875
chr21 59399 0.13% 183
chr22 91352 0.18% 308
chrX 112084 0.07% 451
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 24238 153 2506 317.9 259
global segment-length histogram

Files

Filename Size md5
ENCFF497BBM.bed.gz 390.69 KB 9db7ebc1d1c779ed93b2c91843e9abf8
ENCFF497BBM.tabix.bed.gz 221.43 KB 907887d331ff1e15160887ca68c1c5e4
ENCFF497BBM.tabix.bed.gz.tbi 95.72 KB f657f10599bcc9f6742b36af942219e1
genomic_resource.yaml 2.47 KB a293400dab98e89c707a60322e814daa
statistics/