Histone_ChIP-seq_ENCSR276HBK
Histone_ChIP-seq ENCSR276HBK [biosample_summary="Homo sapiens H9" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR276HBK |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR276HBK [biosamplesummary="Homo sapiens H9" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN235NRF|/analyses/ENCAN235NRF/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF371SZR|/files/ENCFF371SZR/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 14258661 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF804YUX|/files/ENCFF804YUX/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 17762636 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR276HBK | float |
Histone_ChIP-seq_ENCSR276HBK |
Histone_ChIP-seq ENCSR276HBK [biosample_summary="Homo sapiens H9" and target="H3K4me1"]
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[1.68, 14.3] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF123YZZ.bed.gz | 1.78 MB | fca132b06763425202232f0f03123454 |
| ENCFF123YZZ.bed.gz.dvc | 101.0 B | df90b7080a3d55f2633ab0e3808730e6 |
| ENCFF123YZZ.tabix.bed.gz | 895.6 KB | cc2478c0c2eca29bb0322b91ca3135b7 |
| ENCFF123YZZ.tabix.bed.gz.dvc | 106.0 B | 455539841f30a867a87fb9d5d3c5e04d |
| ENCFF123YZZ.tabix.bed.gz.tbi | 370.88 KB | ec7791975f35189a87967965fd22f4e7 |
| ENCFF123YZZ.tabix.bed.gz.tbi.dvc | 110.0 B | 489bd406f57e8a625d261ea48af3a3df |
| genomic_resource.yaml | 2.36 KB | 6d90bbb27174ee48ca8e3e127147b16a |
| genomic_resource_original.yaml | 2.25 KB | f6d6a901e693396fd9e5628ffe627600 |
| statistics/ |