Resource

Id Histone_ChIP-seq/ENCSR275GBWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR275GBW [biosample_summary="Homo sapiens mucosa of rectum tissue female adult (50 years)" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR275GBW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0003346/
  • biosample_summary: Homo sapiens mucosa of rectum tissue female adult (50 years)
  • date_created: 2016-03-03T20:36:40.192790+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR275GBW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (50 years)
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR275GBW float

Histone_ChIP-seq_ENCSR275GBW
Histone_ChIP-seq ENCSR275GBW [biosample_summary="Homo sapiens mucosa of rectum tissue female adult (50 years)" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR275GBW [1.97, 50.8]
n
30,041,784
mean
10.5
sd
6.06

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 300417840.93% 43889
chr1 3216275 1.29% 4593
chr1_KI270713v1_random 170 0.42% 1
chr2 2047173 0.85% 2984
chr3 1668165 0.84% 2324
chr4 1054574 0.55% 1458
chr5 1368530 0.75% 1917
chr6 1712807 1.00% 2364
chr7 1360055 0.85% 2013
chr8 982042 0.68% 1465
chr9 1267685 0.92% 1892
chr10 1303035 0.97% 1942
chr11 1714328 1.27% 2449
chr12 1629836 1.22% 2258
chr13 560436 0.49% 779
chr14 1078571 1.01% 1563
chr15 1008795 0.99% 1467
chr16 1216802 1.35% 1912
chr17 1991518 2.39% 2974
chr17_GL000205v2_random 1348 0.73% 1
chr18 459167 0.57% 676
chr19 1872824 3.19% 2870
chr20 823465 1.28% 1250
chr21 307308 0.66% 472
chr22 776685 1.53% 1239
chrUn_GL000219v1 2108 1.18% 5
chrUn_KI270587v1 191 6.43% 1
chrX 617891 0.40% 1020
3339 contigs with no values (185895997 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 43889 160 9282 684.49 500
global segment-length histogram

Files

Filename Size md5
ENCFF703VCH.bed.gz 895.93 KB b28dfc107dfca058f0b6bf108e67885d
ENCFF703VCH.tabix.bed.gz 439.32 KB 50a48581e2c0e245f06212be12c7c8b7
ENCFF703VCH.tabix.bed.gz.tbi 165.9 KB 43e023bce28a9137b021a787c10cd507
genomic_resource.yaml 1.52 KB 4f26065a71084db94509cbf6805ab91d
statistics/