Resource

Id Histone_ChIP-seq/ENCSR272GZGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR272GZG [biosample_summary="Homo sapiens stomach smooth muscle tissue female adult (84 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR272GZG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004222/
  • biosample_summary: Homo sapiens stomach smooth muscle tissue female adult (84 years)
  • date_created: 2015-09-15T19:52:34.510423+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR272GZG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (84 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR272GZG float

Histone_ChIP-seq_ENCSR272GZG
Histone_ChIP-seq ENCSR272GZG [biosample_summary="Homo sapiens stomach smooth muscle tissue female adult (84 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR272GZG [1.79, 21.8]
n
71,437,193
mean
6.66
sd
2.36

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 714371932.22% 132254
chr1 7004132 2.81% 12676
chr1_KI270711v1_random 291 0.69% 1
chr2 5090287 2.10% 10082
chr3 4396099 2.22% 8344
chr4 2349489 1.24% 4893
chr5 3003729 1.65% 5953
chr6 3070003 1.80% 6076
chr7 3126344 1.96% 6036
chr8 2300398 1.58% 4678
chr9 3652085 2.64% 6368
chr10 3378846 2.53% 6545
chr11 4030401 2.98% 7025
chr12 3956698 2.97% 6959
chr13 1343723 1.17% 2814
chr14 2311321 2.16% 4384
chr15 2687787 2.64% 5091
chr16 3571368 3.95% 6056
chr17 4224415 5.07% 7307
chr17_GL000205v2_random 157 0.08% 1
chr18 1060463 1.32% 2347
chr19 4423825 7.55% 7185
chr20 2492466 3.87% 4282
chr21 881842 1.89% 1620
chr22 2247159 4.42% 3659
chrUn_KI270744v1 744 0.44% 2
chrX 833121 0.53% 1870
3340 contigs with no values (185908227 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 132254 155 20493 540.15 394
global segment-length histogram

Files

Filename Size md5
ENCFF915CJT.bed.gz 2.36 MB c545ba7aa79762d76ed74d04261c291e
ENCFF915CJT.tabix.bed.gz 1.18 MB 6af872765c3aafd460092b677333508c
ENCFF915CJT.tabix.bed.gz.tbi 196.0 KB af9ddd8606b7e219fbbed657c9e25d14
genomic_resource.yaml 2.04 KB 9b5e802c62ab6c2980b446bb944ebd1e
statistics/