Resource

Id Histone_ChIP-seq/ENCSR272CIVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR272CIV [biosample_summary="Homo sapiens spleen tissue female adult (51 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR272CIV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (51 years)
  • date_created: 2018-10-31T03:05:01.259626+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR272CIV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR272CIV float

Histone_ChIP-seq_ENCSR272CIV
Histone_ChIP-seq ENCSR272CIV [biosample_summary="Homo sapiens spleen tissue female adult (51 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR272CIV [1.2, 10.2]
n
27,367,428
mean
3.6
sd
1.11

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 273674280.85% 56365
chr1 1598240 0.64% 3389
chr1_KI270709v1_random 11761 17.59% 24
chr1_KI270712v1_random 905 0.51% 3
chr2 1629367 0.67% 3790
chr2_KI270716v1_random 5330 3.47% 10
chr3 1304704 0.66% 3109
chr4 1408568 0.74% 3193
chr4_GL000008v2_random 4438 2.12% 4
chr5 1812238 1.00% 3911
chr5_GL000208v1_random 5336 5.76% 16
chr6 1115331 0.65% 2625
chr7 1921976 1.21% 3860
chr8 1208560 0.83% 2701
chr9 847576 0.61% 1802
chr9_KI270719v1_random 3850 2.18% 13
chr9_KI270720v1_random 1531 3.92% 6
chr10 1384828 1.04% 2778
chr11 1228722 0.91% 2657
chr12 1393961 1.05% 2666
chr13 597399 0.52% 1596
chr14 654057 0.61% 1488
chr14_GL000009v2_random 864 0.43% 6
chr14_GL000194v1_random 885 0.46% 3
chr14_GL000225v1_random 15733 7.45% 60
chr14_KI270723v1_random 252 0.66% 2
chr14_KI270725v1_random 1118 0.65% 5
chr15 662016 0.65% 1340
chr16 837031 0.93% 1703
chr16_KI270728v1_random 467 0.02% 3
chr17 488790 0.59% 990
chr17_GL000205v2_random 4720 2.54% 14
chr17_KI270729v1_random 80838 28.78% 123
chr17_KI270730v1_random 17578 15.62% 37
chr18 463875 0.58% 1101
chr19 3873052 6.61% 4560
chr20 443866 0.69% 1090
chr21 505872 1.08% 1122
chr22 275316 0.54% 661
chr22_KI270732v1_random 4436 10.68% 14
chr22_KI270733v1_random 3486 1.94% 16
chr22_KI270735v1_random 7474 17.46% 25
chr22_KI270736v1_random 78834 43.33% 135
chr22_KI270737v1_random 601 0.58% 3
chr22_KI270738v1_random 21156 21.29% 42
chrUn_GL000214v1 574 0.42% 4
chrUn_GL000216v2 1253 0.71% 8
chrUn_GL000218v1 1696 1.05% 7
chrUn_GL000219v1 2560 1.43% 11
chrUn_GL000220v1 108 0.07% 1
chrUn_GL000224v1 14549 8.10% 35
chrUn_KI270320v1 143 3.24% 1
chrUn_KI270333v1 242 8.97% 1
chrUn_KI270336v1 251 24.46% 1
chrUn_KI270420v1 127 5.47% 1
chrUn_KI270429v1 344 25.28% 1
chrUn_KI270435v1 6539 7.03% 15
chrUn_KI270438v1 33742 29.99% 79
chrUn_KI270442v1 99360 25.34% 220
chrUn_KI270448v1 1636 20.47% 5
chrUn_KI270465v1 248 13.98% 1
chrUn_KI270466v1 339 27.49% 2
chrUn_KI270468v1 746 18.40% 3
chrUn_KI270507v1 1041 19.45% 4
chrUn_KI270508v1 756 38.75% 3
chrUn_KI270509v1 656 28.30% 2
chrUn_KI270510v1 383 15.86% 2
chrUn_KI270511v1 2155 26.52% 5
chrUn_KI270512v1 2224 9.80% 7
chrUn_KI270515v1 1758 27.64% 4
chrUn_KI270516v1 441 33.92% 1
chrUn_KI270517v1 1316 40.45% 2
chrUn_KI270518v1 504 23.06% 1
chrUn_KI270519v1 17045 12.34% 61
chrUn_KI270521v1 194 2.54% 1
chrUn_KI270522v1 1173 20.67% 3
chrUn_KI270538v1 6241 6.84% 15
chrUn_KI270580v1 502 32.32% 2
chrUn_KI270584v1 708 15.69% 3
chrUn_KI270588v1 1289 20.93% 6
chrUn_KI270589v1 2946 6.62% 5
chrUn_KI270590v1 2058 43.93% 3
chrUn_KI270591v1 2749 47.43% 6
chrUn_KI270593v1 433 14.24% 1
chrUn_KI270742v1 431 0.23% 4
chrUn_KI270744v1 2123 1.26% 9
chrUn_KI270746v1 4118 6.19% 16
chrUn_KI270747v1 951 0.48% 2
chrUn_KI270749v1 1879 1.18% 8
chrUn_KI270750v1 5858 3.94% 17
chrUn_KI270751v1 4022 2.67% 14
chrUn_KI270753v1 498 0.79% 1
chrUn_KI270754v1 223 0.55% 2
chrUn_KI270756v1 6489 8.15% 10
chrUn_KI270757v1 9740 13.67% 26
chrX 1169244 0.75% 2961
chrY 23885 0.04% 66
3270 contigs with no values (120923540 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 56365 95 29169 485.54 324
global segment-length histogram

Files

Filename Size md5
ENCFF384WIJ.bed.gz 1.09 MB 10b0c72e3055261185e9d4dc4297e6c8
ENCFF384WIJ.tabix.bed.gz 555.67 KB 5c1d819ddd187c866be4c1d174cd51eb
ENCFF384WIJ.tabix.bed.gz.tbi 223.13 KB f1fe8da2f7b22fac83079c9943b542da
genomic_resource.yaml 1.49 KB 9b3162e606e04c1069ef9745e17681a4
statistics/