Histone_ChIP-seq_ENCSR271TFS
Histone_ChIP-seq ENCSR271TFS [biosample_summary="Homo sapiens H1" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR271TFS |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR271TFS [biosamplesummary="Homo sapiens H1" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN943BKF|/analyses/ENCAN943BKF/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF441KOL|/files/ENCFF441KOL/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 8803218 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF286FND|/files/ENCFF286FND/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 11632622 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR271TFS | float |
Histone_ChIP-seq_ENCSR271TFS |
Histone_ChIP-seq ENCSR271TFS [biosample_summary="Homo sapiens H1" and target="H3K4me1"]
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[1.93, 28.1] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF694ENI.bed.gz | 3.14 MB | 8882b18f3df46a5594984cd8f58e29d3 |
| ENCFF694ENI.bed.gz.dvc | 101.0 B | 38739d800d0c80e154e2973315470197 |
| ENCFF694ENI.tabix.bed.gz | 1.56 MB | b05091c352f6a43f5ce0106c0db5fdd8 |
| ENCFF694ENI.tabix.bed.gz.dvc | 107.0 B | fc4f08324d383b68556c5639a692bf5a |
| ENCFF694ENI.tabix.bed.gz.tbi | 458.46 KB | 9ff8e7194ba3114f1bb5ed677c5ec599 |
| ENCFF694ENI.tabix.bed.gz.tbi.dvc | 110.0 B | 8d09bbc40dec657a2dba1c5918bb56cf |
| genomic_resource.yaml | 2.36 KB | 35fdcf58a7720b39f9e71ae38b4394d6 |
| genomic_resource_original.yaml | 2.25 KB | 5dec745c960e4407eb15929dddc5007f |
| statistics/ |