Resource

Id Histone_ChIP-seq/ENCSR270VNKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR270VNK [biosample_summary="Homo sapiens small intestine tissue female adult (30 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR270VNK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002108/
  • biosample_summary: Homo sapiens small intestine tissue female adult (30 years)
  • date_created: 2015-10-01T07:17:31.275278+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR270VNK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (30 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR270VNK float

Histone_ChIP-seq_ENCSR270VNK
Histone_ChIP-seq ENCSR270VNK [biosample_summary="Homo sapiens small intestine tissue female adult (30 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR270VNK [1.88, 9.99]
n
1,891,897
mean
4.02
sd
0.777

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 18918970.06% 9896
chr1 68553 0.03% 363
chr2 97872 0.04% 545
chr3 98177 0.05% 533
chr4 99140 0.05% 550
chr5 122480 0.07% 671
chr6 88684 0.05% 493
chr7 166707 0.10% 881
chr8 105482 0.07% 553
chr9 56199 0.04% 296
chr10 49498 0.04% 274
chr11 57059 0.04% 325
chr12 84325 0.06% 429
chr13 35781 0.03% 199
chr14 65954 0.06% 364
chr15 86129 0.08% 421
chr16 64434 0.07% 328
chr17 32519 0.04% 161
chr18 27733 0.03% 159
chr19 273756 0.47% 1260
chr20 38523 0.06% 193
chr21 85223 0.18% 415
chr22 23279 0.05% 110
chrX 64026 0.04% 371
chrY 364 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 9896 130 1136 191.18 167
global segment-length histogram

Files

Filename Size md5
ENCFF266AOW.bed.gz 168.68 KB 5450021415e8f604123a3afc7f9df427
ENCFF266AOW.tabix.bed.gz 93.38 KB 36df1cce1adce568ea748df2bca9238c
ENCFF266AOW.tabix.bed.gz.tbi 72.36 KB a96b08afca914f5f808a1680ae4a4b5b
genomic_resource.yaml 2.22 KB 1611ea7168a144e70766c15eb7007759
statistics/