Resource

Id Histone_ChIP-seq/ENCSR263OXWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR263OXW [biosample_summary="Homo sapiens upper lobe of left lung tissue female adult (53 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR263OXW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008952/
  • biosample_summary: Homo sapiens upper lobe of left lung tissue female adult (53 years)
  • date_created: 2017-12-06T21:08:17.656299+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR263OXW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR263OXW float

Histone_ChIP-seq_ENCSR263OXW
Histone_ChIP-seq ENCSR263OXW [biosample_summary="Homo sapiens upper lobe of left lung tissue female adult (53 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR263OXW [1.62, 9.75]
n
97,613,776
mean
3.71
sd
1.09

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 976137763.03% 106787
chr1 9900707 3.98% 10473
chr2 7822926 3.23% 8695
chr3 6575729 3.32% 7466
chr4 3399578 1.79% 4182
chr5 4802498 2.65% 5620
chr6 5306365 3.11% 6169
chr7 4415619 2.77% 5138
chr8 3896060 2.68% 4556
chr9 4333316 3.13% 4595
chr10 5108128 3.82% 5540
chr11 5361750 3.97% 5570
chr12 4953649 3.72% 5381
chr13 2135584 1.87% 2578
chr14 3308769 3.09% 3569
chr15 3594305 3.52% 3831
chr16 3674277 4.07% 3719
chr17 5611888 6.74% 5474
chr18 1619383 2.01% 1991
chr19 4200964 7.17% 4113
chr20 3017136 4.68% 3037
chr21 1097479 2.35% 1239
chr22 2632882 5.18% 2620
chrX 844784 0.54% 1231
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 106787 250 23881 914.1 649
global segment-length histogram

Files

Filename Size md5
ENCFF608MRB.bed.gz 2.14 MB 6baace16155e57c60ba660b82ac8faf3
ENCFF608MRB.tabix.bed.gz 1.07 MB 99f5c70e2285cf2daac1eaa4ef423b4c
ENCFF608MRB.tabix.bed.gz.tbi 275.92 KB 1ab9d057fdae9bf67c831245e17ae2a9
genomic_resource.yaml 1.55 KB 3b2e48eff92ae7455677861e97b160c1
statistics/