Histone_ChIP-seq_ENCSR263ELQ
Histone_ChIP-seq ENCSR263ELQ [biosample_summary="Homo sapiens iPS DF 6.9" and target="H3K4me3"]
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| Id: | Histone_ChIP-seq/ENCSR263ELQ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR263ELQ [biosamplesummary="Homo sapiens iPS DF 6.9" and target="H3K4me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN042LSP|/analyses/ENCAN042LSP/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_warning: PBC1 (PCR Bottlenecking Coefficient 1, M1/M_distinct) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where some reads map (M_distinct). A PBC1 value in the range 0 - 0.5 is severe bottlenecking, 0.5 - 0.8 is moderate bottlenecking, 0.8 - 0.9 is mild bottlenecking, and > 0.9 is no bottlenecking. PBC1 value > 0.9 is recommended, but > 0.8 is acceptable. ENCODE processed alignments file {ENCFF771MGJ|/files/ENCFF771MGJ/} processed by ChIP-seq ENCODE3 hg19 pipeline was generated from a library with PBC1 value of 0.90. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR263ELQ | float |
Histone_ChIP-seq_ENCSR263ELQ |
Histone_ChIP-seq ENCSR263ELQ [biosample_summary="Homo sapiens iPS DF 6.9" and target="H3K4me3"]
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[1.7, 50] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF334CSR.bed.gz | 761.8 KB | 648523eb7186a49cd8f3a758ab81d435 |
| ENCFF334CSR.bed.gz.dvc | 100.0 B | aeb366c157fa1d5b72503e6ddbfef3ad |
| ENCFF334CSR.tabix.bed.gz | 318.99 KB | 0118a9005d5220652e98280f64cd4c3b |
| ENCFF334CSR.tabix.bed.gz.dvc | 106.0 B | 2dd443641a6c86b855e981e333fc9e7e |
| ENCFF334CSR.tabix.bed.gz.tbi | 146.59 KB | 6187044d46f3a8029b6f7aeb38e86c16 |
| ENCFF334CSR.tabix.bed.gz.tbi.dvc | 110.0 B | 09bf3d1e0fe0a51d6ff98dd726d0b235 |
| genomic_resource.yaml | 2.04 KB | 023557c2228d772f6755bc1144c68b7f |
| genomic_resource_original.yaml | 1.93 KB | 1187ed17d747f6ef9301bdc2b7627617 |
| statistics/ |