Resource

Id Histone_ChIP-seq/ENCSR262JRZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR262JRZ [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR262JRZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2022-05-11T01:54:23.497224+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR262JRZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (90 or above years) with Alzheimer's disease
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR262JRZ float

Histone_ChIP-seq_ENCSR262JRZ
Histone_ChIP-seq ENCSR262JRZ [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR262JRZ [1.46, 55.6]
n
134,848,881
mean
8.78
sd
6.32

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1348488814.19% 86886
chr1 13406434 5.39% 8349
chr2 9966079 4.11% 6656
chr3 8374805 4.22% 5499
chr4 5461168 2.87% 3693
chr5 7305501 4.02% 4925
chr6 6983860 4.09% 4666
chr7 6297934 3.95% 4302
chr8 5480912 3.78% 3674
chr9 6701288 4.84% 4158
chr10 6998942 5.23% 4347
chr11 8374666 6.20% 5020
chr12 6948234 5.21% 4547
chr13 3194025 2.79% 2184
chr14 4544293 4.25% 2883
chr15 4655566 4.56% 2970
chr16 4636493 5.13% 2976
chr17 7327192 8.80% 4364
chr18 2682165 3.34% 1814
chr19 5277432 9.00% 3238
chr20 3830547 5.94% 2376
chr21 1405691 3.01% 918
chr22 3178350 6.25% 1949
chrX 1817304 1.16% 1378
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 86886 218 79998 1552.02 1010
global segment-length histogram

Files

Filename Size md5
ENCFF810ZTP.bed.gz 1.87 MB 6117bea7fca3946b5f84e4c588335c21
ENCFF810ZTP.tabix.bed.gz 906.3 KB 2b6e2726f2a4f763ce32ce17b05a02ce
ENCFF810ZTP.tabix.bed.gz.tbi 256.08 KB 398601625558bce8177ec13638d1f3bd
genomic_resource.yaml 1.75 KB cbed8fbe6252929a120e3fd78758e654
statistics/