Resource

Id Histone_ChIP-seq/ENCSR261ZUWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR261ZUW [biosample_summary="Homo sapiens lower lobe of left lung tissue male adult (60 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR261ZUW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008953/
  • biosample_summary: Homo sapiens lower lobe of left lung tissue male adult (60 years)
  • date_created: 2020-05-01T02:35:13.184642+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR261ZUW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR261ZUW float

Histone_ChIP-seq_ENCSR261ZUW
Histone_ChIP-seq ENCSR261ZUW [biosample_summary="Homo sapiens lower lobe of left lung tissue male adult (60 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR261ZUW [1.49, 12]
n
51,866,256
mean
4.31
sd
1.51

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 518662561.61% 50134
chr1 3318561 1.33% 3347
chr2 3909958 1.61% 4228
chr3 3281834 1.66% 3528
chr4 3480848 1.83% 3731
chr5 3810221 2.10% 3806
chr6 2780001 1.63% 3043
chr7 3399116 2.13% 3297
chr8 2820907 1.94% 2688
chr9 1867335 1.35% 1825
chr10 2144563 1.60% 2111
chr11 2359465 1.75% 2347
chr12 2770805 2.08% 2463
chr13 1575095 1.38% 1873
chr14 1448446 1.35% 1590
chr15 1343893 1.32% 1265
chr16 1407049 1.56% 1239
chr17 840524 1.01% 767
chr18 1114298 1.39% 1239
chr19 5702517 9.73% 2992
chr20 806988 1.25% 885
chr21 790178 1.69% 872
chr22 530811 1.04% 543
chrX 305527 0.20% 386
chrY 57316 0.10% 69
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 50134 210 57684 1034.55 747
global segment-length histogram

Files

Filename Size md5
ENCFF580CFB.bed.gz 984.9 KB 2ee0fc32f87123509eaf44a57f0e6ee8
ENCFF580CFB.tabix.bed.gz 503.62 KB 695823f33850f40d3111f8be31283c14
ENCFF580CFB.tabix.bed.gz.tbi 239.36 KB 9969130d78c0bc2731da1369b3789e7d
genomic_resource.yaml 1.75 KB 8825b0707ea4f41dda28437687df49f1
statistics/