Resource

Id Histone_ChIP-seq/ENCSR261LYDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR261LYD [biosample_summary="Homo sapiens BLaER1 168 hours after the\ \ sample was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10\ \ ng/mL CSF1" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR261LYD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 168 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:35.430576+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR261LYD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 168 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR261LYD float

Histone_ChIP-seq_ENCSR261LYD
Histone_ChIP-seq ENCSR261LYD [biosample_summary="Homo sapiens BLaER1 168 hours after the\ \ sample was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10\ \ ng/mL CSF1" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR261LYD [1.67, 70.8]
n
48,208,337
mean
27.9
sd
15.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 482083371.50% 26966
chr1 4619342 1.86% 2550
chr2 3172989 1.31% 1800
chr3 2606128 1.31% 1408
chr4 1845059 0.97% 991
chr5 2270799 1.25% 1179
chr6 2674582 1.57% 1438
chr7 2296229 1.44% 1297
chr8 1857047 1.28% 1080
chr9 1929008 1.39% 1104
chr10 2096598 1.57% 1172
chr11 2556783 1.89% 1384
chr12 2620398 1.97% 1407
chr13 984416 0.86% 557
chr14 1546945 1.45% 835
chr15 1565497 1.53% 896
chr16 2008219 2.22% 1146
chr17 2937416 3.53% 1629
chr18 755441 0.94% 446
chr19 3643123 6.22% 2226
chr20 1297548 2.01% 727
chr21 500248 1.07% 303
chr22 1052804 2.07% 604
chrX 1371718 0.88% 787
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 26966 250 19753 1787.75 1395
global segment-length histogram

Files

Filename Size md5
ENCFF674RMB.bed.gz 761.79 KB 1d11b1479e741385585f7665efce3020
ENCFF674RMB.tabix.bed.gz 318.56 KB 9d6ef4217482720294626af1954e7c09
ENCFF674RMB.tabix.bed.gz.tbi 157.88 KB 9156efe96f347e5c83198f084d4df40d
genomic_resource.yaml 2.32 KB 31ce6858195dab34002d380e798587cb
statistics/