type: position_score
table:
  filename: ENCFF661YCK.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR258UUX
  column_index: 3
  type: float
  desc: signal
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'ChIP-seq ENCSR258UUX [TISSUE: Homo sapiens vagina tissue female adult
    (53 years), TARGET: H3K4me3]'
  description: '**status**: released


    **biological\_replicates**: Rep 1, Rep 2


    **summary**: female adult (53 years)


    **output\_type**: replicated peaks


    **audit\_internal\_action**: Archived analysis {ENCAN081SRE|/analyses/ENCAN081SRE/}
    has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/}


    **audit\_warning**: Processed alignments file {ENCFF587VBR|/files/ENCFF587VBR/}
    processed by ChIP-seq ENCODE3 hg19 pipeline has 19785331 usable fragments. The
    minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments.
    The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/})'
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR258UUX
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: female adult (53 years)
    biosample_summary: Homo sapiens vagina tissue female adult (53 years)
    replication_type: isogenic
    biosample_ontology: /biosample-types/tissue_UBERON_0000996/
    perturbed: false
    doi: 10.17989/ENCSR258UUX
    date_created: '2016-10-19T23:03:54.017700+00:00'
    date_released: '2016-11-02'
    submitter_comment: The lab has submitted new control fastqs, prompting new peak
      and signal calls for its downstream experiments.
    target: H3K4me3
