Resource

Id Histone_ChIP-seq/ENCSR257VEOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR257VEO [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (82 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR257VEO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue male adult (82 years)
  • date_created: 2021-08-25T18:07:28.115253+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR257VEO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (82 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR257VEO float

Histone_ChIP-seq_ENCSR257VEO
Histone_ChIP-seq ENCSR257VEO [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (82 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR257VEO [1.77, 56.4]
n
61,711,981
mean
22.8
sd
13.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 617119811.92% 35959
chr1 5991073 2.41% 3455
chr2 4369192 1.80% 2554
chr3 3708165 1.87% 2066
chr4 2582883 1.36% 1467
chr5 3232082 1.78% 1827
chr6 3622852 2.12% 2112
chr7 2989322 1.88% 1870
chr8 2488933 1.71% 1436
chr9 2509483 1.81% 1526
chr10 2721989 2.03% 1599
chr11 3311415 2.45% 1838
chr12 3276208 2.46% 1805
chr13 1470419 1.29% 892
chr14 1961001 1.83% 1123
chr15 1946332 1.91% 1162
chr16 2297984 2.54% 1401
chr17 3248626 3.90% 1894
chr18 1186594 1.48% 715
chr19 3520919 6.01% 2093
chr20 1581506 2.45% 971
chr21 601065 1.29% 372
chr22 1343249 2.64% 795
chrX 1693990 1.09% 959
chrY 56699 0.10% 27
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 35959 220 37629 1716.18 1205
global segment-length histogram

Files

Filename Size md5
ENCFF324FFN.bed.gz 897.68 KB 2664219965893d2adbd68905a6c39b64
ENCFF324FFN.tabix.bed.gz 402.13 KB a6bca673cade1e6e3584c1789e8c8bc8
ENCFF324FFN.tabix.bed.gz.tbi 200.44 KB 5e0b0894dddbac7305078ce92d4fe0fe
genomic_resource.yaml 1.56 KB a0e8d7d5bef0e4614a0fb57608ee5f10
statistics/