Resource

Id Histone_ChIP-seq/ENCSR251PPBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR251PPB [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR251PPB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-01-28T04:10:42.424718+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR251PPB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR251PPB float

Histone_ChIP-seq_ENCSR251PPB
Histone_ChIP-seq ENCSR251PPB [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR251PPB [1.79, 64.1]
n
145,273,976
mean
10.7
sd
8.04

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1452739764.52% 91408
chr1 14382286 5.78% 8667
chr2 10793202 4.46% 7064
chr3 9006118 4.54% 5874
chr4 5899919 3.10% 3888
chr5 7857524 4.33% 5080
chr6 7458868 4.37% 4856
chr7 6847344 4.30% 4651
chr8 6041747 4.16% 3904
chr9 6863432 4.96% 4170
chr10 7439614 5.56% 4568
chr11 8887992 6.58% 5241
chr12 7625347 5.72% 4813
chr13 3453359 3.02% 2236
chr14 4758865 4.45% 2983
chr15 5114309 5.01% 3179
chr16 5136652 5.69% 3219
chr17 7828092 9.40% 4565
chr18 2885984 3.59% 1904
chr19 5821960 9.93% 3465
chr20 4079450 6.33% 2520
chr21 1563733 3.35% 1042
chr22 3500235 6.89% 2043
chrX 2027944 1.30% 1476
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 91408 225 79904 1589.29 1001
global segment-length histogram

Files

Filename Size md5
ENCFF010VMY.bed.gz 1.98 MB 3e7463bbfa748db01f99f2f5b1227f88
ENCFF010VMY.tabix.bed.gz 955.24 KB 12f893541c27fc02d5f7cf02dbf27767
ENCFF010VMY.tabix.bed.gz.tbi 264.8 KB 780f317e12eccb7b9001a478dbee3696
genomic_resource.yaml 1.77 KB f312caed32c3137a84b101a451b77c8d
statistics/