Resource

Id Histone_ChIP-seq/ENCSR251DKXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR251DKX [biosample_summary="Homo sapiens BLaER1 36 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me2"]
Description
Labels
  • accession: ENCSR251DKX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 36 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:22.979684+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR251DKX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 36 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K4me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR251DKX float

Histone_ChIP-seq_ENCSR251DKX
Histone_ChIP-seq ENCSR251DKX [biosample_summary="Homo sapiens BLaER1 36 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me2"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR251DKX [1.34, 36.5]
n
234,856,683
mean
10.7
sd
6.56

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2348566837.30% 185085
chr1 22576993 9.07% 17530
chr1_KI270707v1_random 319 1.00% 1
chr1_KI270712v1_random 2258 1.28% 4
chr1_KI270713v1_random 7331 17.99% 11
chr1_KI270714v1_random 1290 3.09% 2
chr2 17815554 7.36% 14844
chr3 12672560 6.39% 10860
chr3_GL000221v1_random 3924 2.53% 6
chr4 8285787 4.36% 7639
chr4_GL000008v2_random 311 0.15% 1
chr5 11240099 6.19% 9485
chr6 11647789 6.82% 9737
chr7 11424067 7.17% 9561
chr8 10536791 7.26% 8679
chr9 10246456 7.40% 7892
chr9_KI270718v1_random 585 1.54% 2
chr9_KI270719v1_random 397 0.22% 1
chr10 11930819 8.92% 9518
chr11 11892358 8.80% 8851
chr11_KI270721v1_random 1851 1.85% 4
chr12 10922970 8.20% 8382
chr13 4944087 4.32% 4584
chr14 7595841 7.10% 5770
chr14_GL000009v2_random 641 0.32% 1
chr14_GL000194v1_random 2770 1.45% 4
chr14_GL000225v1_random 593 0.28% 1
chr14_KI270723v1_random 1235 3.24% 2
chr14_KI270724v1_random 642 1.62% 1
chr14_KI270726v1_random 1408 3.22% 3
chr15 7924043 7.77% 6233
chr15_KI270727v1_random 2112 0.47% 5
chr16 10533484 11.66% 7322
chr16_KI270728v1_random 2224 0.12% 3
chr17 13725982 16.49% 9057
chr17_GL000205v2_random 14961 8.06% 11
chr17_KI270729v1_random 725 0.26% 2
chr18 4499052 5.60% 3949
chr19 10706933 18.27% 6849
chr20 8167385 12.67% 6187
chr21 3378779 7.23% 2570
chr22 7025880 13.83% 4696
chr22_KI270731v1_random 1957 1.30% 4
chr22_KI270733v1_random 5264 2.93% 8
chr22_KI270734v1_random 2066 1.25% 5
chrUn_GL000195v1 4823 2.64% 7
chrUn_GL000214v1 1193 0.87% 2
chrUn_GL000216v2 1298 0.73% 1
chrUn_GL000219v1 8937 4.99% 11
chrUn_GL000220v1 1078 0.67% 3
chrUn_GL000224v1 872 0.49% 1
chrUn_KI270438v1 254 0.23% 1
chrUn_KI270442v1 881 0.22% 1
chrUn_KI270519v1 1286 0.93% 2
chrUn_KI270742v1 373 0.20% 1
chrUn_KI270744v1 7472 4.44% 8
chrUn_KI270751v1 1310 0.87% 2
chrUn_KI270753v1 2774 4.41% 3
chrUn_KI270755v1 265 0.72% 1
chrX 5072228 3.25% 4758
chrY 3066 0.01% 6
3306 contigs with no values (121831227 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 185085 250 51864 1268.91 719
global segment-length histogram

Files

Filename Size md5
ENCFF078NXJ.bed.gz 4.21 MB fe3aa31e7f10b085d663b3ac14f2257b
ENCFF078NXJ.tabix.bed.gz 1.9 MB 67107c246d5ae097ca98a9b54767802d
ENCFF078NXJ.tabix.bed.gz.tbi 396.77 KB b05e366dde5660d1bad6ee5115ec9229
genomic_resource.yaml 3.12 KB 1ec7fb1ffb93fc245fcd4041112d5c7d
statistics/