Resource

Id Histone_ChIP-seq/ENCSR250CLOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR250CLO [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR250CLO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-08-25T18:07:43.186562+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR250CLO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with Alzheimer's disease
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR250CLO float

Histone_ChIP-seq_ENCSR250CLO
Histone_ChIP-seq ENCSR250CLO [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR250CLO [1.62, 7.75]
n
8,775,949
mean
3.94
sd
1.04

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 87759490.27% 10676
chr1 395403 0.16% 394
chr2 515337 0.21% 440
chr3 155331 0.08% 163
chr4 322244 0.17% 260
chr5 389827 0.21% 328
chr6 566512 0.33% 553
chr7 460650 0.29% 359
chr8 232726 0.16% 223
chr9 232923 0.17% 215
chr10 402845 0.30% 363
chr11 218446 0.16% 217
chr12 334647 0.25% 278
chr13 153953 0.13% 142
chr14 262840 0.25% 251
chr15 205504 0.20% 215
chr16 185994 0.21% 196
chr17 412837 0.50% 370
chr18 106406 0.13% 102
chr19 193813 0.33% 253
chr20 187331 0.29% 205
chr21 98333 0.21% 115
chr22 69417 0.14% 88
chrX 2672630 1.71% 4946
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 10676 210 12125 822.03 565
global segment-length histogram

Files

Filename Size md5
ENCFF873HRF.bed.gz 192.48 KB d23cbad18dafd673ca4eb3b5fa47a26f
ENCFF873HRF.tabix.bed.gz 103.81 KB 1f219c58057f50712f2cd8c3b5f0c97c
ENCFF873HRF.tabix.bed.gz.tbi 50.7 KB 6b3654db6d63e756dba321f0d726d983
genomic_resource.yaml 1.75 KB 74f66a7c36a470893c35eb6ebbbd4986
statistics/