Histone_ChIP-seq_ENCSR249AWJ
Histone_ChIP-seq ENCSR249AWJ [biosample_summary="Homo sapiens amnion tissue male embryo (16 weeks)" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR249AWJ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR249AWJ [biosamplesummary="Homo sapiens amnion tissue male embryo (16 weeks)" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (16 weeks) output_type: pseudoreplicated peaks audit_internal_action: Archived analysis {ENCAN370KOY|/analyses/ENCAN370KOY/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed redacted alignments file {ENCFF610XDU|/files/ENCFF610XDU/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 22976558 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR249AWJ | float |
Histone_ChIP-seq_ENCSR249AWJ |
Histone_ChIP-seq ENCSR249AWJ [biosample_summary="Homo sapiens amnion tissue male embryo (16 weeks)" and target="H3K4me1"]
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[1.88, 13.4] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF060QYJ.bed.gz | 1.43 MB | 34ad19ed58303da2f6eda78d07617b43 |
| ENCFF060QYJ.bed.gz.dvc | 101.0 B | df087400ce0dd9973b023621838fe90a |
| ENCFF060QYJ.tabix.bed.gz | 751.78 KB | 55e4b1a69ae490cdace1e977f10cf4f3 |
| ENCFF060QYJ.tabix.bed.gz.dvc | 106.0 B | f2830e9fdea25d37153237f524dd51a2 |
| ENCFF060QYJ.tabix.bed.gz.tbi | 262.27 KB | 5ceb23874572dfbc39670668839c870f |
| ENCFF060QYJ.tabix.bed.gz.tbi.dvc | 110.0 B | edb1565a929a84248654a82a0cd10dee |
| genomic_resource.yaml | 1.98 KB | 07894e56203cb2535768fb2d8f3f0009 |
| genomic_resource_original.yaml | 1.85 KB | c8dcba9cf16ec849099225158130ef9c |
| statistics/ |