Resource

Id Histone_ChIP-seq/ENCSR245ZCUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR245ZCU [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (42 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR245ZCU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0001059/
  • biosample_summary: Homo sapiens common myeloid progenitor, CD34-positive male adult (42 years)
  • date_created: 2015-09-15T19:48:57.914503+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR245ZCU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (42 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR245ZCU float

Histone_ChIP-seq_ENCSR245ZCU
Histone_ChIP-seq ENCSR245ZCU [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (42 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR245ZCU [1.33, 24.5]
n
74,806,794
mean
6.04
sd
2.55

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 748067942.33% 198694
chr1 5571782 2.24% 14835
chr1_KI270708v1_random 311 0.24% 2
chr1_KI270709v1_random 3690 5.52% 11
chr1_KI270712v1_random 725 0.41% 3
chr1_KI270713v1_random 282 0.69% 1
chr2 5987020 2.47% 16294
chr2_KI270716v1_random 5124 3.33% 12
chr3 4652191 2.35% 12850
chr4 4090338 2.15% 11523
chr4_GL000008v2_random 4336 2.07% 1
chr5 4612808 2.54% 12774
chr5_GL000208v1_random 3428 3.70% 13
chr6 4109933 2.41% 11513
chr7 4623956 2.90% 12688
chr8 3626316 2.50% 9892
chr9 2819786 2.04% 7399
chr9_KI270719v1_random 968 0.55% 4
chr9_KI270720v1_random 798 2.04% 2
chr10 3885883 2.90% 10256
chr11 3029364 2.24% 8504
chr12 3596369 2.70% 9456
chr13 2302776 2.01% 6515
chr14 2188420 2.04% 5984
chr14_GL000194v1_random 888 0.46% 4
chr14_GL000225v1_random 25191 11.93% 80
chr14_KI270722v1_random 8318 4.29% 26
chr14_KI270723v1_random 1155 3.03% 5
chr14_KI270724v1_random 757 1.91% 4
chr14_KI270725v1_random 188 0.11% 1
chr15 2268649 2.22% 5875
chr16 1999454 2.21% 4921
chr16_KI270728v1_random 694 0.04% 4
chr17 1659484 1.99% 4269
chr17_GL000205v2_random 37460 20.18% 41
chr17_KI270729v1_random 70091 24.96% 132
chr17_KI270730v1_random 14653 13.02% 27
chr18 1691050 2.10% 4643
chr19 6161950 10.51% 11734
chr20 1572017 2.44% 4056
chr21 1089315 2.33% 2757
chr22 790158 1.55% 1992
chr22_KI270732v1_random 574 1.38% 3
chr22_KI270733v1_random 1164 0.65% 5
chr22_KI270735v1_random 1866 4.36% 5
chr22_KI270736v1_random 64520 35.47% 154
chr22_KI270737v1_random 1079 1.04% 4
chr22_KI270738v1_random 28468 28.65% 73
chrUn_GL000214v1 1007 0.73% 5
chrUn_GL000216v2 55088 31.19% 78
chrUn_GL000218v1 189 0.12% 1
chrUn_GL000219v1 13193 7.36% 36
chrUn_GL000224v1 14723 8.19% 35
chrUn_KI270320v1 165 3.74% 1
chrUn_KI270429v1 354 26.01% 1
chrUn_KI270435v1 947 1.02% 5
chrUn_KI270438v1 25082 22.29% 73
chrUn_KI270442v1 78796 20.10% 146
chrUn_KI270448v1 1761 22.03% 7
chrUn_KI270465v1 225 12.68% 1
chrUn_KI270468v1 339 8.36% 2
chrUn_KI270507v1 383 7.15% 2
chrUn_KI270509v1 275 11.86% 1
chrUn_KI270510v1 294 12.17% 1
chrUn_KI270511v1 1286 15.82% 5
chrUn_KI270512v1 1096 4.83% 2
chrUn_KI270515v1 291 4.57% 1
chrUn_KI270516v1 226 17.38% 1
chrUn_KI270519v1 3835 2.78% 14
chrUn_KI270521v1 603 7.89% 3
chrUn_KI270522v1 305 5.38% 1
chrUn_KI270538v1 6165 6.75% 23
chrUn_KI270584v1 486 10.77% 1
chrUn_KI270588v1 211 3.43% 1
chrUn_KI270589v1 2947 6.63% 1
chrUn_KI270590v1 366 7.81% 2
chrUn_KI270591v1 1081 18.65% 3
chrUn_KI270742v1 736 0.39% 4
chrUn_KI270743v1 1132 0.54% 6
chrUn_KI270744v1 517 0.31% 2
chrUn_KI270746v1 1067 1.60% 6
chrUn_KI270747v1 375 0.19% 1
chrUn_KI270749v1 359 0.23% 2
chrUn_KI270750v1 807 0.54% 4
chrUn_KI270751v1 1291 0.86% 3
chrUn_KI270753v1 213 0.34% 1
chrUn_KI270754v1 393 0.98% 2
chrUn_KI270756v1 6727 8.45% 18
chrUn_KI270757v1 3175 4.46% 7
chrX 1671695 1.07% 5865
chrY 300841 0.53% 973
3276 contigs with no values (120693624 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 198694 110 19853 376.49 276
global segment-length histogram

Files

Filename Size md5
ENCFF884ABW.bed.gz 3.42 MB e2da525165f8b307aa327993f1a194a2
ENCFF884ABW.tabix.bed.gz 1.74 MB 3ff8b973ddebb65a8a4d0f4d8f9c8d08
ENCFF884ABW.tabix.bed.gz.tbi 476.42 KB 59a5f9a03427668b99b618acb6212ba8
genomic_resource.yaml 2.05 KB b4885ce98754523711284372c0c3e29e
statistics/