Resource

Id Histone_ChIP-seq/ENCSR243UVCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR243UVC [biosample_summary="Homo sapiens subcutaneous abdominal adipose tissue tissue nuclear fraction female adult (49 years)" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR243UVC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0014455/
  • biosample_summary: Homo sapiens subcutaneous abdominal adipose tissue tissue nuclear fraction female adult (49 years)
  • date_created: 2015-09-15T19:52:46.480470+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR243UVC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (49 years) nuclear fraction
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR243UVC float

Histone_ChIP-seq_ENCSR243UVC
Histone_ChIP-seq ENCSR243UVC [biosample_summary="Homo sapiens subcutaneous abdominal adipose tissue tissue nuclear fraction female adult (49 years)" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR243UVC [1.81, 45.1]
n
18,059,326
mean
5.92
sd
2.38

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 180593260.56% 30470
chr1 1936481 0.78% 3235
chr2 1334279 0.55% 2251
chr3 1174944 0.59% 1981
chr4 647071 0.34% 1092
chr5 944571 0.52% 1580
chr6 1019741 0.60% 1692
chr7 848010 0.53% 1455
chr8 645920 0.45% 1146
chr9 736342 0.53% 1302
chr10 864532 0.65% 1468
chr11 1088206 0.81% 1774
chr12 1084949 0.81% 1729
chr13 353458 0.31% 613
chr14 575618 0.54% 975
chr15 601622 0.59% 1007
chr16 600636 0.66% 1056
chr17 1040171 1.25% 1724
chr18 281586 0.35% 516
chr19 984643 1.68% 1589
chr20 463928 0.72% 800
chr21 165465 0.35% 292
chr22 400519 0.79% 678
chrX 266634 0.17% 515
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 30470 185 6131 592.69 477
global segment-length histogram

Files

Filename Size md5
ENCFF813ZZH.bed.gz 588.8 KB 1e21fda49cfa41d5e15536ec8888623d
ENCFF813ZZH.tabix.bed.gz 300.92 KB f4e3a41c3f52c2c60433200c3db0932e
ENCFF813ZZH.tabix.bed.gz.tbi 145.61 KB c0509c3f1a29b1f49c5474edb979de1d
genomic_resource.yaml 1.67 KB b547cd78cad0291420a0e1956d29c032
statistics/