Resource

Id Histone_ChIP-seq/ENCSR242AHBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR242AHB [biosample_summary="Homo sapiens ovary tissue female adult (51 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR242AHB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000992/
  • biosample_summary: Homo sapiens ovary tissue female adult (51 years)
  • date_created: 2019-07-29T21:34:59.850513+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR242AHB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR242AHB float

Histone_ChIP-seq_ENCSR242AHB
Histone_ChIP-seq ENCSR242AHB [biosample_summary="Homo sapiens ovary tissue female adult (51 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR242AHB [1.68, 38]
n
25,826,121
mean
6.68
sd
3.41

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 258261210.80% 24399
chr1 2776255 1.12% 2542
chr1_KI270713v1_random 583 1.43% 1
chr2 1889319 0.78% 1783
chr3 1391512 0.70% 1386
chr4 800672 0.42% 813
chr5 1094560 0.60% 1010
chr6 1227772 0.72% 1147
chr7 1100696 0.69% 1105
chr8 943527 0.65% 928
chr9 1202060 0.87% 1078
chr10 1283422 0.96% 1204
chr11 1653588 1.22% 1467
chr12 1375526 1.03% 1242
chr13 436090 0.38% 437
chr14 828699 0.77% 795
chr15 832696 0.82% 834
chr16 911228 1.01% 957
chr17 1639511 1.97% 1482
chr18 415934 0.52% 424
chr19 1653445 2.82% 1504
chr20 736437 1.14% 693
chr21 301969 0.65% 283
chr22 749363 1.47% 692
chrUn_GL000219v1 870 0.49% 2
chrX 580387 0.37% 590
3341 contigs with no values (186084557 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 24399 225 17177 1058.49 822
global segment-length histogram

Files

Filename Size md5
ENCFF077BWP.bed.gz 588.62 KB 2e063ccaf09c64e6bb7e7791dfd4d984
ENCFF077BWP.tabix.bed.gz 269.49 KB 2f11cc1d9af722fbaeb45d80392c276f
ENCFF077BWP.tabix.bed.gz.tbi 127.47 KB 27a72292bd359732c2788990d3a9711e
genomic_resource.yaml 1.49 KB dd72a43425990d17621bbf6bc7cb15d6
statistics/