Resource

Id Histone_ChIP-seq/ENCSR240GDTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR240GDT [biosample_summary="Homo sapiens heart right ventricle tissue female adult (46 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR240GDT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue female adult (46 years)
  • date_created: 2020-05-01T02:11:27.709994+00:00
  • date_released: 2020-09-15
  • doi: 10.17989/ENCSR240GDT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (46 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR240GDT float

Histone_ChIP-seq_ENCSR240GDT
Histone_ChIP-seq ENCSR240GDT [biosample_summary="Homo sapiens heart right ventricle tissue female adult (46 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR240GDT [1.7, 65.4]
n
101,755,100
mean
11.5
sd
9.08

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1017551003.16% 66431
chr1 10247516 4.12% 6488
chr2 7629370 3.15% 5137
chr3 6809950 3.43% 4411
chr4 3968530 2.09% 2758
chr5 5252710 2.89% 3482
chr6 5487507 3.21% 3715
chr7 4534738 2.85% 3143
chr8 4213214 2.90% 2938
chr9 4530921 3.27% 2950
chr10 5620088 4.20% 3595
chr11 5259958 3.89% 3378
chr12 5439993 4.08% 3420
chr13 2304152 2.01% 1615
chr14 3248913 3.04% 2063
chr15 3653345 3.58% 2357
chr16 3614220 4.00% 2343
chr17 5527517 6.64% 3309
chr18 1985569 2.47% 1400
chr19 4217569 7.20% 2519
chr20 2905773 4.51% 1842
chr21 986404 2.11% 704
chr22 2749598 5.41% 1647
chrX 1567545 1.00% 1217
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 66431 235 47861 1531.74 1102
global segment-length histogram

Files

Filename Size md5
ENCFF749JEY.bed.gz 1.52 MB 1d934873eefea6c2935124c786bd32ed
ENCFF749JEY.tabix.bed.gz 715.74 KB e75d06b4c97ff3db5e3c11314b812e7d
ENCFF749JEY.tabix.bed.gz.tbi 230.17 KB e68ae31451ea9f5e17b1ca33ac17a0f2
genomic_resource.yaml 1.76 KB b62dda58ec3b2097307dcecd88f51044
statistics/