Resource

Id Histone_ChIP-seq/ENCSR237GVUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR237GVU [biosample_summary="Homo sapiens gastroesophageal sphincter tissue male adult (54 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR237GVU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004550/
  • biosample_summary: Homo sapiens gastroesophageal sphincter tissue male adult (54 years)
  • date_created: 2017-12-06T21:08:03.480737+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR237GVU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR237GVU float

Histone_ChIP-seq_ENCSR237GVU
Histone_ChIP-seq ENCSR237GVU [biosample_summary="Homo sapiens gastroesophageal sphincter tissue male adult (54 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR237GVU [1.78, 5.21]
n
432,693
mean
3.22
sd
0.605

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 4326930.01% 1098
chr1 16744 0.01% 49
chr2 14649 0.01% 45
chr3 9073 <0.01% 29
chr4 26436 0.01% 73
chr5 27227 0.01% 70
chr6 10309 0.01% 37
chr7 15651 0.01% 43
chr8 10322 0.01% 31
chr9 26009 0.02% 68
chr10 13235 0.01% 38
chr11 8308 0.01% 31
chr12 31539 0.02% 61
chr13 10500 0.01% 33
chr14 4929 <0.01% 19
chr15 6722 0.01% 21
chr16 13601 0.02% 33
chr17 7590 0.01% 16
chr18 6116 0.01% 18
chr19 153523 0.26% 319
chr20 2908 <0.01% 11
chr21 15138 0.03% 45
chr22 2164 <0.01% 8
3344 contigs with no values (342345395 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 1098 195 3466 394.07 297
global segment-length histogram

Files

Filename Size md5
ENCFF621DYI.bed.gz 19.27 KB dfb038d94895e7a3b1689e86f6102c80
ENCFF621DYI.tabix.bed.gz 10.79 KB 974690c0e43edaf1613533908ede2dc5
ENCFF621DYI.tabix.bed.gz.tbi 11.72 KB ee84ba6a6f951302396fe71753af48ac
genomic_resource.yaml 1.76 KB 53468cddb2829ebe400978e4cbba77ba
statistics/