Resource

Id Histone_ChIP-seq/ENCSR236JVKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR236JVK [biosample_summary="Homo sapiens CD14-positive monocyte male adult (21 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR236JVK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0001054/
  • biosample_summary: Homo sapiens CD14-positive monocyte male adult (21 years)
  • date_created: 2015-09-16T21:42:10.065367+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR236JVK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (21 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR236JVK float

Histone_ChIP-seq_ENCSR236JVK
Histone_ChIP-seq ENCSR236JVK [biosample_summary="Homo sapiens CD14-positive monocyte male adult (21 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR236JVK [1.62, 47.1]
n
80,134,462
mean
7.92
sd
4.58

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 801344622.49% 142441
chr1 4447870 1.79% 8254
chr2 5937278 2.45% 11256
chr3 4683601 2.36% 8997
chr4 5263129 2.77% 9982
chr5 5544202 3.05% 10323
chr6 4450624 2.61% 8465
chr7 6383871 4.01% 10999
chr8 3874510 2.67% 6910
chr9 2330999 1.68% 4179
chr10 3427774 2.56% 6173
chr11 2866411 2.12% 5391
chr12 3460498 2.60% 5990
chr13 3371797 2.95% 6683
chr14 2098336 1.96% 3983
chr15 2083489 2.04% 3596
chr16 2137481 2.37% 3464
chr17 1611962 1.94% 2717
chr18 1938397 2.41% 3674
chr19 6961826 11.88% 9010
chr20 1814537 2.82% 2602
chr21 1489478 3.19% 2655
chr22 811863 1.60% 1354
chrX 2714270 1.74% 5009
chrY 430259 0.75% 775
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 142441 200 96912 562.58 408
global segment-length histogram

Files

Filename Size md5
ENCFF338FXC.bed.gz 2.71 MB 855f373a219eb3fda384919f430d5d92
ENCFF338FXC.tabix.bed.gz 1.34 MB a89508daedb3cc41ff378b428958b406
ENCFF338FXC.tabix.bed.gz.tbi 436.85 KB ad8994a78778890552b7591276e610d0
genomic_resource.yaml 1.51 KB a3ce22945ee224b53b130aa6cbe9c824
statistics/