Histone_ChIP-seq_ENCSR235APD
Histone_ChIP-seq ENCSR235APD [biosample_summary="Homo sapiens iPS-18a" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR235APD |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR235APD [biosamplesummary="Homo sapiens iPS-18a" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1 summary: output_type: pseudoreplicated peaks audit_internal_action: Archived analysis {ENCAN408ZMO|/analyses/ENCAN408ZMO/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF691OQO|/files/ENCFF691OQO/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 34378653 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR235APD | float |
Histone_ChIP-seq_ENCSR235APD |
Histone_ChIP-seq ENCSR235APD [biosample_summary="Homo sapiens iPS-18a" and target="H3K4me1"]
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[1.75, 14.4] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF729IXP.bed.gz | 2.83 MB | a79350e577981f13d819df25ba190cc2 |
| ENCFF729IXP.bed.gz.dvc | 101.0 B | ce6c00bbb8528fd2b51026933c241061 |
| ENCFF729IXP.tabix.bed.gz | 1.37 MB | 996dcb58a1ba675fcd45db6e42a5fe96 |
| ENCFF729IXP.tabix.bed.gz.dvc | 107.0 B | 4e70e33bda8e65db5563d1f3f20784f9 |
| ENCFF729IXP.tabix.bed.gz.tbi | 448.13 KB | 019f61664b7bbb4598ca449bb1d3a352 |
| ENCFF729IXP.tabix.bed.gz.tbi.dvc | 110.0 B | fba5f2b8030f27cac158d6a725e5af83 |
| genomic_resource.yaml | 1.88 KB | e982a6e5f4ffdb10920d7e05e4b5ba54 |
| genomic_resource_original.yaml | 1.77 KB | d006266992fa022cc45552e5ea609bf0 |
| statistics/ |