Resource

Id Histone_ChIP-seq/ENCSR234YIUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR234YIU [biosample_summary="Homo sapiens adrenal gland tissue male adult (34 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR234YIU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue male adult (34 years)
  • date_created: 2015-09-16T19:17:31.781144+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR234YIU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (34 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR234YIU float

Histone_ChIP-seq_ENCSR234YIU
Histone_ChIP-seq ENCSR234YIU [biosample_summary="Homo sapiens adrenal gland tissue male adult (34 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR234YIU [1.34, 27.4]
n
13,724,055
mean
8.46
sd
3.42

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 137240550.43% 16857
chr1 1346360 0.54% 1647
chr2 969720 0.40% 1174
chr3 790169 0.40% 946
chr4 565944 0.30% 672
chr5 654484 0.36% 784
chr6 743387 0.44% 926
chr7 683826 0.43% 826
chr8 541452 0.37% 656
chr9 588761 0.43% 692
chr10 601017 0.45% 703
chr11 730734 0.54% 926
chr12 711536 0.53% 846
chr13 285906 0.25% 333
chr14 455568 0.43% 554
chr15 457268 0.45% 544
chr16 558966 0.62% 701
chr17 759874 0.91% 982
chr17_GL000205v2_random 789 0.43% 1
chr18 260020 0.32% 291
chr19 841891 1.44% 1120
chr20 361982 0.56% 427
chr21 129167 0.28% 151
chr22 310272 0.61% 396
chrM 1899 11.46% 3
chrUn_GL000219v1 1012 0.56% 2
chrX 361783 0.23% 536
chrY 10268 0.02% 18
3339 contigs with no values (128695727 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 16857 190 4362 814.15 720
global segment-length histogram

Files

Filename Size md5
ENCFF243YCB.bed.gz 412.96 KB 18a785ab25dbfee62d369a0244da84cc
ENCFF243YCB.tabix.bed.gz 186.81 KB 60d86f8008bbeaa0930a7cd873ceb379
ENCFF243YCB.tabix.bed.gz.tbi 115.43 KB 682cb62663804b4c2625c1bc7366bbc7
genomic_resource.yaml 1.5 KB 9766ab99e352f5e46639d5684e2364a1
statistics/