Resource

Id Histone_ChIP-seq/ENCSR230BWNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR230BWN [biosample_summary="Homo sapiens kidney tissue male adult (67 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR230BWN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002113/
  • biosample_summary: Homo sapiens kidney tissue male adult (67 years)
  • date_created: 2015-09-15T19:52:18.743705+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR230BWN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (67 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR230BWN float

Histone_ChIP-seq_ENCSR230BWN
Histone_ChIP-seq ENCSR230BWN [biosample_summary="Homo sapiens kidney tissue male adult (67 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR230BWN [1.9, 66.5]
n
51,392,770
mean
10.2
sd
7.27

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 513927701.60% 64331
chr1 5394674 2.17% 6501
chr1_KI270713v1_random 193 0.47% 1
chr2 4010151 1.66% 5043
chr3 3015164 1.52% 3930
chr4 2134261 1.12% 2800
chr5 2488483 1.37% 3154
chr6 2719655 1.59% 3574
chr7 2282941 1.43% 2880
chr8 1859733 1.28% 2483
chr9 2363023 1.71% 2978
chr10 2523415 1.89% 3113
chr11 2772615 2.05% 3400
chr12 2700337 2.03% 3300
chr13 1178799 1.03% 1560
chr14 1701288 1.59% 2164
chr15 1794913 1.76% 2275
chr16 1895782 2.10% 2390
chr17 3014349 3.62% 3464
chr18 1007301 1.25% 1286
chr19 2248618 3.84% 2676
chr20 1350714 2.10% 1647
chr21 625005 1.34% 808
chr22 1286745 2.53% 1546
chrUn_GL000219v1 670 0.37% 2
chrX 992624 0.64% 1318
chrY 31317 0.05% 38
3340 contigs with no values (128857142 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 64331 170 16251 798.88 561
global segment-length histogram

Files

Filename Size md5
ENCFF512JNT.bed.gz 1.37 MB 68ce292e5ac89603f0b9015480637c5a
ENCFF512JNT.tabix.bed.gz 664.08 KB 22d64b7b9890a36ba0b35a52b3603405
ENCFF512JNT.tabix.bed.gz.tbi 208.51 KB cbec458495118457aadad758d6580416
genomic_resource.yaml 1.97 KB 925691eb9d21b83c9483e495ff084ef1
statistics/