Resource

Id Histone_ChIP-seq/ENCSR229GELcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR229GEL [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (54 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR229GEL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008952/
  • biosample_summary: Homo sapiens upper lobe of left lung tissue male adult (54 years)
  • date_created: 2017-12-06T21:05:41.043400+00:00
  • date_released: 2018-12-14
  • doi: 10.17989/ENCSR229GEL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR229GEL float

Histone_ChIP-seq_ENCSR229GEL
Histone_ChIP-seq ENCSR229GEL [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (54 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR229GEL [1.75, 7.78]
n
10,380,289
mean
3.64
sd
0.763

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 103802890.32% 32513
chr1 1167327 0.47% 3522
chr1_KI270711v1_random 430 1.02% 2
chr2 699972 0.29% 2348
chr3 597718 0.30% 1936
chr4 286674 0.15% 1016
chr5 491573 0.27% 1659
chr6 409912 0.24% 1375
chr7 404812 0.25% 1324
chr8 261131 0.18% 908
chr9 464461 0.34% 1428
chr10 398400 0.30% 1341
chr11 589450 0.44% 1785
chr12 688977 0.52% 2095
chr13 133772 0.12% 508
chr14 414573 0.39% 1291
chr15 377344 0.37% 1250
chr16 521977 0.58% 1556
chr17 759096 0.91% 2187
chr18 127379 0.16% 440
chr19 834891 1.42% 2236
chr20 304639 0.47% 973
chr21 103070 0.22% 346
chr22 320507 0.63% 911
chr22_KI270733v1_random 222 0.12% 1
chrUn_KI270507v1 123 2.30% 1
chrX 21502 0.01% 73
chrY 357 <0.01% 1
3339 contigs with no values (128849750 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 32513 90 3506 319.27 256
global segment-length histogram

Files

Filename Size md5
ENCFF444AOJ.bed.gz 586.45 KB abed6f3895a7b647aa595bf5043d8d7b
ENCFF444AOJ.tabix.bed.gz 311.62 KB 312ec058dd3697c21f6d058daad3ab8f
ENCFF444AOJ.tabix.bed.gz.tbi 100.52 KB 3ce11262c0e9517a8abd55ba177d5748
genomic_resource.yaml 1.54 KB fcbd24f7f872228002573383e3581988
statistics/