Resource

Id Histone_ChIP-seq/ENCSR227FYJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR227FYJ [biosample_summary="Homo sapiens foreskin melanocyte male newborn" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR227FYJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000045/
  • biosample_summary: Homo sapiens foreskin melanocyte male newborn
  • date_created: 2015-09-15T20:26:58.576106+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR227FYJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male newborn
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR227FYJ float

Histone_ChIP-seq_ENCSR227FYJ
Histone_ChIP-seq ENCSR227FYJ [biosample_summary="Homo sapiens foreskin melanocyte male newborn" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR227FYJ [1.57, 98.5]
n
81,708,417
mean
11.1
sd
10

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 817084172.54% 86258
chr1 8070963 3.24% 8518
chr2 6212401 2.57% 6562
chr3 4704081 2.37% 5046
chr4 3234718 1.70% 3482
chr5 3923011 2.16% 4226
chr6 4680691 2.74% 4799
chr7 3865576 2.43% 4224
chr8 3216825 2.22% 3350
chr9 3527243 2.55% 3749
chr10 3742296 2.80% 3901
chr11 4592613 3.40% 4655
chr12 4447732 3.34% 4581
chr13 1760173 1.54% 1915
chr14 2669283 2.49% 2758
chr15 2919022 2.86% 3067
chr16 3276717 3.63% 3507
chr17 4882304 5.86% 5074
chr18 1514491 1.88% 1587
chr19 4225231 7.21% 4272
chr20 2118112 3.29% 2418
chr21 785793 1.68% 874
chr22 1916796 3.77% 2094
chrX 1382072 0.89% 1558
chrY 40273 0.07% 41
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 86258 185 27633 947.26 625.5
global segment-length histogram

Files

Filename Size md5
ENCFF329IPA.bed.gz 2.08 MB 6f643d43d3f5a278e84a76fa70a9b1b3
ENCFF329IPA.tabix.bed.gz 934.14 KB 9a085fbab8933eaa29f5c796dc827e42
ENCFF329IPA.tabix.bed.gz.tbi 276.74 KB db0eb487f72e6267c679a4589d7f4629
genomic_resource.yaml 1.46 KB 9c7d061324d3f5f2c9eb3b13ad7af2d0
statistics/