Resource

Id Histone_ChIP-seq/ENCSR227DGGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR227DGG [biosample_summary="Homo sapiens stomach tissue male adult (37 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR227DGG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000945/
  • biosample_summary: Homo sapiens stomach tissue male adult (37 years)
  • date_created: 2019-04-27T23:00:57.870489+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR227DGG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR227DGG float

Histone_ChIP-seq_ENCSR227DGG
Histone_ChIP-seq ENCSR227DGG [biosample_summary="Homo sapiens stomach tissue male adult (37 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR227DGG [1.15, 25.3]
n
101,361,222
mean
6.33
sd
4.48

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1013612223.15% 75317
chr1 10901481 4.38% 7981
chr1_KI270709v1_random 784 1.17% 1
chr1_KI270712v1_random 7960 4.52% 7
chr1_KI270713v1_random 5571 13.67% 4
chr1_KI270714v1_random 1546 3.71% 4
chr2 6159141 2.54% 4840
chr3 3235342 1.63% 2587
chr4 3006674 1.58% 2007
chr5 4672045 2.57% 3395
chr6 4700045 2.75% 3479
chr7 4432385 2.78% 3218
chr8 4225304 2.91% 3227
chr9 4132893 2.99% 2741
chr9_KI270717v1_random 524 1.31% 1
chr10 5445219 4.07% 4247
chr11 5591331 4.14% 4440
chr12 5212499 3.91% 3913
chr13 2140189 1.87% 1698
chr14 3281616 3.07% 2637
chr14_GL000225v1_random 1191 0.56% 1
chr14_KI270725v1_random 2058 1.19% 2
chr15 3117212 3.06% 2625
chr16 4156087 4.60% 3230
chr17 6944693 8.34% 4547
chr17_GL000205v2_random 66626 35.90% 20
chr17_KI270729v1_random 871 0.31% 1
chr18 1675329 2.08% 1494
chr19 6787847 11.58% 4445
chr20 5364311 8.32% 3915
chr21 1327538 2.84% 1087
chr22 4049008 7.97% 3029
chr22_KI270732v1_random 2076 5.00% 2
chr22_KI270733v1_random 12277 6.83% 16
chr22_KI270735v1_random 1416 3.31% 1
chr22_KI270738v1_random 1391 1.40% 2
chrM 3315 20.01% 3
chrUn_GL000195v1 3804 2.08% 9
chrUn_GL000214v1 603 0.44% 1
chrUn_GL000218v1 848 0.53% 2
chrUn_GL000219v1 18829 10.51% 16
chrUn_GL000220v1 2819 1.74% 5
chrUn_GL000224v1 6760 3.76% 7
chrUn_KI270442v1 889 0.23% 2
chrUn_KI270744v1 7164 4.25% 6
chrUn_KI270749v1 2646 1.67% 2
chrX 638557 0.41% 406
chrY 12508 0.02% 14
3319 contigs with no values (125759429 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 75317 225 130893 1345.79 784
global segment-length histogram

Files

Filename Size md5
ENCFF655HBD.bed.gz 1.57 MB e73f295e62b0d71a340ab8857bc5aa8d
ENCFF655HBD.tabix.bed.gz 778.33 KB b59be941ae03991936c1ba6b761e6745
ENCFF655HBD.tabix.bed.gz.tbi 180.19 KB a84c19579e3f57da488aef8c0843e715
genomic_resource.yaml 1.49 KB 050aa43e1f5f88b75d15848523528d15
statistics/