Resource

Id Histone_ChIP-seq/ENCSR220TRWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR220TRW [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (89 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR220TRW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (89 years)
  • date_created: 2021-01-28T04:10:58.053220+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR220TRW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (89 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR220TRW float

Histone_ChIP-seq_ENCSR220TRW
Histone_ChIP-seq ENCSR220TRW [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (89 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR220TRW [1.81, 41.1]
n
78,692,178
mean
10.9
sd
7.27

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 786921782.45% 46257
chr1 8051543 3.23% 4693
chr2 5895713 2.43% 3411
chr3 4609818 2.32% 2683
chr4 3821728 2.01% 2126
chr5 4021271 2.22% 2384
chr6 4442278 2.60% 2506
chr7 3814059 2.39% 2364
chr8 2750876 1.90% 1673
chr9 4286670 3.10% 2336
chr10 4134525 3.09% 2269
chr11 4703325 3.48% 2628
chr12 3593852 2.70% 2258
chr13 2135081 1.87% 1189
chr14 2827035 2.64% 1645
chr15 2882731 2.83% 1665
chr16 2431652 2.69% 1536
chr17 4009593 4.82% 2418
chr18 1619792 2.02% 930
chr19 2803409 4.78% 1881
chr20 2113775 3.28% 1259
chr21 962056 2.06% 581
chr22 1387590 2.73% 815
chrX 1393806 0.89% 1007
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 46257 240 77106 1701.2 998
global segment-length histogram

Files

Filename Size md5
ENCFF272ROP.bed.gz 1.03 MB 58595f4e62673575bbebfb82b7c7014b
ENCFF272ROP.tabix.bed.gz 493.54 KB 182320b476785aa681f9ac2a2062b878
ENCFF272ROP.tabix.bed.gz.tbi 161.06 KB cdaa70b8372cff652c6512bb997400b0
genomic_resource.yaml 1.57 KB fa4f8e5c48cbac0ede4b495f579dc2ee
statistics/