Resource

Id Histone_ChIP-seq/ENCSR218KHFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR218KHF [biosample_summary="Homo sapiens BLaER1 12 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR218KHF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 12 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:48.670046+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR218KHF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 12 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR218KHF float

Histone_ChIP-seq_ENCSR218KHF
Histone_ChIP-seq ENCSR218KHF [biosample_summary="Homo sapiens BLaER1 12 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR218KHF [1.32, 87.1]
n
83,956,949
mean
17.1
sd
16.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 839569492.61% 87494
chr1 8123840 3.26% 8484
chr1_KI270713v1_random 2564 6.29% 4
chr2 5526361 2.28% 5909
chr3 4074975 2.06% 4224
chr3_GL000221v1_random 571 0.37% 1
chr4 2614284 1.37% 2709
chr5 3788754 2.09% 3746
chr6 4012277 2.35% 3934
chr7 3946444 2.48% 4203
chr8 3397374 2.34% 3671
chr9 3681490 2.66% 3943
chr9_KI270719v1_random 347 0.20% 1
chr10 3714520 2.78% 3961
chr11 4334656 3.21% 4452
chr11_KI270721v1_random 667 0.66% 2
chr12 4152923 3.12% 4148
chr13 1573041 1.38% 1529
chr14 2845930 2.66% 2954
chr14_GL000009v2_random 450 0.22% 1
chr14_GL000194v1_random 1191 0.62% 2
chr14_KI270723v1_random 652 1.71% 1
chr15 2639571 2.59% 2811
chr16 4267481 4.72% 4618
chr16_KI270728v1_random 809 0.04% 1
chr17 5842887 7.02% 6015
chr17_GL000205v2_random 9111 4.91% 6
chr18 1368358 1.70% 1417
chr19 5556743 9.48% 5476
chr20 2720274 4.22% 3094
chr21 1134205 2.43% 1274
chr22 2752011 5.42% 3158
chr22_KI270731v1_random 256 0.17% 1
chr22_KI270733v1_random 2699 1.50% 7
chrUn_GL000195v1 3093 1.69% 5
chrUn_GL000219v1 3738 2.09% 4
chrUn_GL000220v1 259 0.16% 1
chrUn_GL000224v1 325 0.18% 1
chrUn_KI270438v1 4414 3.92% 3
chrUn_KI270519v1 311 0.23% 1
chrUn_KI270744v1 1804 1.07% 3
chrUn_KI270753v1 450 0.71% 1
chrX 1853278 1.19% 1714
chrY 1561 <0.01% 4
3323 contigs with no values (124597977 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 87494 250 27022 959.57 491
global segment-length histogram

Files

Filename Size md5
ENCFF560SAB.bed.gz 1.89 MB 47388fdef7a263bbf278e150e8b686e4
ENCFF560SAB.tabix.bed.gz 903.52 KB 1b5a3b717825b0dd2cabaa6e52d64213
ENCFF560SAB.tabix.bed.gz.tbi 245.29 KB 28991462f7499b363712fd9990567e2f
genomic_resource.yaml 3.12 KB 81f4c786329f2bae0e964433595a6b34
statistics/