Resource

Id Histone_ChIP-seq/ENCSR217SDTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR217SDT [biosample_summary="Homo sapiens BLaER1 48 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR217SDT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 48 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:19.555882+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR217SDT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 48 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR217SDT float

Histone_ChIP-seq_ENCSR217SDT
Histone_ChIP-seq ENCSR217SDT [biosample_summary="Homo sapiens BLaER1 48 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR217SDT [1.21, 78.9]
n
117,237,073
mean
18.6
sd
17.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1172370733.64% 104859
chr1 11343664 4.56% 10029
chr1_KI270712v1_random 1687 0.96% 3
chr1_KI270713v1_random 1547 3.80% 3
chr2 8629620 3.56% 7976
chr3 6711814 3.38% 6143
chr3_GL000221v1_random 739 0.48% 1
chr4 4432968 2.33% 4079
chr5 5844947 3.22% 5184
chr6 6205940 3.63% 5427
chr7 5573842 3.50% 5263
chr8 5161934 3.56% 4756
chr9 4847617 3.50% 4466
chr9_KI270718v1_random 1756 4.61% 5
chr9_KI270719v1_random 414 0.23% 1
chr10 5568688 4.16% 4900
chr11 5734028 4.24% 5094
chr11_KI270721v1_random 366 0.36% 1
chr12 6057169 4.54% 5309
chr13 2461177 2.15% 2227
chr14 3644778 3.40% 3249
chr14_GL000009v2_random 449 0.22% 1
chr14_GL000194v1_random 2064 1.08% 5
chr14_KI270723v1_random 941 2.47% 1
chr15 3838534 3.76% 3509
chr16 5044407 5.58% 4549
chr16_KI270728v1_random 1731 0.09% 3
chr17 6740439 8.10% 5679
chr17_GL000205v2_random 14016 7.55% 9
chr18 2095307 2.61% 1926
chr19 6261153 10.68% 5222
chr20 3693090 5.73% 3291
chr21 1474380 3.16% 1296
chr22 2877060 5.66% 2688
chr22_KI270731v1_random 598 0.40% 2
chr22_KI270733v1_random 2956 1.64% 7
chrUn_GL000195v1 3752 2.05% 5
chrUn_GL000219v1 4697 2.62% 4
chrUn_GL000220v1 737 0.46% 2
chrUn_GL000224v1 280 0.16% 1
chrUn_KI270438v1 277 0.25% 1
chrUn_KI270744v1 4454 2.64% 4
chrUn_KI270753v1 2496 3.97% 3
chrX 2947381 1.89% 2532
chrY 1179 <0.01% 3
3322 contigs with no values (124522006 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 104859 250 37577 1118.04 580
global segment-length histogram

Files

Filename Size md5
ENCFF810ENN.bed.gz 2.31 MB d0c8168bafce7941a38df0c72df7f3aa
ENCFF810ENN.tabix.bed.gz 1.07 MB 2530c2ce8789708cc2f3ae124992c585
ENCFF810ENN.tabix.bed.gz.tbi 294.73 KB 69b3ca5d377e136b74d150ce8f372604
genomic_resource.yaml 3.12 KB 70352d58bacb4a15177bffe8662fd8ab
statistics/