Histone_ChIP-seq_ENCSR216OGD
Histone_ChIP-seq ENCSR216OGD [biosample_summary="Homo sapiens H1" and target="H3K27me3"]
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| Id: | Histone_ChIP-seq/ENCSR216OGD |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR216OGD [biosamplesummary="Homo sapiens H1" and target="H3K27me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN639CMW|/analyses/ENCAN639CMW/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF310SBN|/files/ENCFF310SBN/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 8421770 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF083QQZ|/files/ENCFF083QQZ/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 5265229 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR216OGD | float |
Histone_ChIP-seq_ENCSR216OGD |
Histone_ChIP-seq ENCSR216OGD [biosample_summary="Homo sapiens H1" and target="H3K27me3"]
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[1.59, 77] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF084QDP.bed.gz | 573.43 KB | 5c307e315624e6cc59a1722e5f3703c6 |
| ENCFF084QDP.bed.gz.dvc | 100.0 B | 90b6c77199ebe5798ed198446c84fa2e |
| ENCFF084QDP.tabix.bed.gz | 291.46 KB | 4b82553e8f485f6fd0b1468c856e25fa |
| ENCFF084QDP.tabix.bed.gz.dvc | 106.0 B | a20c8354846dd7274c55af3c1ec14b6f |
| ENCFF084QDP.tabix.bed.gz.tbi | 105.53 KB | f7e9f4d7acc12bba847b258dee6a97ca |
| ENCFF084QDP.tabix.bed.gz.tbi.dvc | 110.0 B | aa535f3888ac1b08060c273da6ac0b24 |
| genomic_resource.yaml | 2.36 KB | 05bacbff6daa4bef79a8bd70d7ef9d0a |
| genomic_resource_original.yaml | 2.26 KB | 84b53da401a5ffc80eff718482d6449a |
| statistics/ |