Resource

Id Histone_ChIP-seq/ENCSR211SBEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR211SBE [biosample_summary="Homo sapiens pancreas tissue female adult (61 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR211SBE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001264/
  • biosample_summary: Homo sapiens pancreas tissue female adult (61 years)
  • date_created: 2020-05-01T02:22:30.632677+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR211SBE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (61 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR211SBE float

Histone_ChIP-seq_ENCSR211SBE
Histone_ChIP-seq ENCSR211SBE [biosample_summary="Homo sapiens pancreas tissue female adult (61 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR211SBE [1.71, 24.8]
n
26,133,432
mean
11.8
sd
4.41

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 261334320.81% 18117
chr1 2620287 1.05% 1801
chr2 1824724 0.75% 1225
chr3 1521668 0.77% 1010
chr4 1080497 0.57% 710
chr5 1204847 0.66% 783
chr6 1488193 0.87% 995
chr7 1307916 0.82% 925
chr8 992128 0.68% 659
chr9 1098580 0.79% 770
chr10 1186297 0.89% 796
chr11 1425090 1.05% 993
chr12 1358108 1.02% 919
chr13 546619 0.48% 347
chr14 886596 0.83% 610
chr15 882179 0.86% 602
chr16 1052559 1.17% 755
chr17 1484398 1.78% 1038
chr18 433210 0.54% 293
chr19 1602556 2.73% 1259
chr20 651921 1.01% 453
chr21 235165 0.50% 170
chr22 565630 1.11% 409
chrX 684264 0.44% 595
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 18117 226 11239 1442.48 1314
global segment-length histogram

Files

Filename Size md5
ENCFF157JTU.bed.gz 443.45 KB 148e09bc8f62593eaee1706a94de78b7
ENCFF157JTU.tabix.bed.gz 204.58 KB 1cc1fa5856c2f02c692353d9ed449644
ENCFF157JTU.tabix.bed.gz.tbi 125.73 KB ad3c4d8281d3caca5b215e27ae240c61
genomic_resource.yaml 1.71 KB 74da598a1f3ede13245ee657edb9671f
statistics/