Resource

Id Histone_ChIP-seq/ENCSR208QRNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR208QRN [biosample_summary="Homo sapiens transverse colon tissue female adult (53 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR208QRN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001157/
  • biosample_summary: Homo sapiens transverse colon tissue female adult (53 years)
  • date_created: 2016-10-19T23:09:46.033472+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR208QRN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR208QRN float

Histone_ChIP-seq_ENCSR208QRN
Histone_ChIP-seq ENCSR208QRN [biosample_summary="Homo sapiens transverse colon tissue female adult (53 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR208QRN [1.24, 59.3]
n
137,973,158
mean
11.9
sd
9.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1379731584.29% 79019
chr1 13805776 5.55% 7597
chr2 10781859 4.45% 6249
chr3 8533290 4.30% 4956
chr4 5670974 2.98% 3469
chr5 6546301 3.61% 3990
chr6 7216539 4.22% 4510
chr7 6266511 3.93% 3761
chr8 5174947 3.57% 3183
chr9 6656376 4.81% 3662
chr10 7495108 5.60% 4118
chr11 7377477 5.46% 3990
chr12 7244647 5.44% 3990
chr13 2936273 2.57% 1786
chr14 4861764 4.54% 2637
chr15 4835658 4.74% 2838
chr16 5111899 5.66% 2958
chr17 7509375 9.02% 3894
chr18 2456128 3.06% 1565
chr19 5747884 9.81% 2930
chr20 3990385 6.19% 2259
chr21 1714768 3.67% 1074
chr22 3332634 6.56% 1807
chrX 2705870 1.73% 1795
chrY 715 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 79019 215 95431 1746.08 1129
global segment-length histogram

Files

Filename Size md5
ENCFF872JBU.bed.gz 2.01 MB c762851dbbc3446a9aeb24120ccbae9b
ENCFF872JBU.tabix.bed.gz 883.8 KB 533285abd0839b4eeefcd1cc3349087a
ENCFF872JBU.tabix.bed.gz.tbi 247.86 KB 89998c753b9be13b1ef92c1a9416ef89
genomic_resource.yaml 1.52 KB 33cc2a4df638542d133901c037e2170b
statistics/