Resource

Id Histone_ChIP-seq/ENCSR207JOIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR207JOI [biosample_summary="Homo sapiens myoepithelial cell of mammary gland female adult (33 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR207JOI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0002324/
  • biosample_summary: Homo sapiens myoepithelial cell of mammary gland female adult (33 years)
  • date_created: 2015-09-15T20:27:47.891817+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR207JOI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (33 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR207JOI float

Histone_ChIP-seq_ENCSR207JOI
Histone_ChIP-seq ENCSR207JOI [biosample_summary="Homo sapiens myoepithelial cell of mammary gland female adult (33 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR207JOI [1.97, 17.2]
n
52,555,249
mean
5.3
sd
1.96

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 525552491.63% 120013
chr1 3344047 1.34% 7844
chr2 3511059 1.45% 8535
chr3 2851481 1.44% 6909
chr4 3114324 1.64% 7385
chr5 3250093 1.79% 7446
chr6 2446561 1.43% 6111
chr7 3311256 2.08% 7540
chr8 2590442 1.78% 6118
chr9 1991575 1.44% 4555
chr10 2459285 1.84% 5711
chr11 2045151 1.51% 4898
chr12 2696287 2.02% 5866
chr13 1425772 1.25% 3497
chr14 1490017 1.39% 3510
chr15 1364563 1.34% 3001
chr16 1599650 1.77% 3373
chr17 1066013 1.28% 2377
chr18 1142712 1.42% 2828
chr19 4196365 7.16% 6696
chr20 1048354 1.63% 2374
chr21 613658 1.31% 1358
chr22 741919 1.46% 1550
chrX 4254520 2.73% 10530
chrY 145 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 120013 135 33057 437.91 338
global segment-length histogram

Files

Filename Size md5
ENCFF120AJF.bed.gz 2.02 MB 6291b0578830498959299e5e9f5e63d0
ENCFF120AJF.tabix.bed.gz 1.07 MB d8fafa0b6caa9d563b88882f277d4c37
ENCFF120AJF.tabix.bed.gz.tbi 410.27 KB bdf7156cee105dc001282f4a0fa3ffe9
genomic_resource.yaml 1.57 KB 1a5bfe3fe2d207726cf11f70d1b7b252
statistics/