Resource

Id Histone_ChIP-seq/ENCSR207FYDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR207FYD [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR207FYD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-04-30T04:17:53.591079+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR207FYD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR207FYD float

Histone_ChIP-seq_ENCSR207FYD
Histone_ChIP-seq ENCSR207FYD [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR207FYD [1.74, 68.7]
n
158,493,697
mean
11.9
sd
9.38

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1584936974.93% 87732
chr1 15627853 6.28% 8380
chr2 11966280 4.94% 6899
chr3 9862314 4.97% 5524
chr4 6829396 3.59% 3874
chr5 8761807 4.83% 4983
chr6 8418806 4.93% 4626
chr7 7611350 4.78% 4489
chr8 6612569 4.56% 3808
chr9 7550843 5.46% 3994
chr10 8192440 6.12% 4348
chr11 9522938 7.05% 4938
chr12 8080061 6.06% 4595
chr13 3844477 3.36% 2208
chr14 5314822 4.97% 2896
chr15 5405475 5.30% 2947
chr16 5379205 5.95% 3111
chr17 8326468 10.00% 4291
chr18 3366660 4.19% 1880
chr19 5840904 9.96% 3157
chr20 4353231 6.76% 2356
chr21 1663290 3.56% 949
chr22 3527339 6.94% 1884
chrX 2435169 1.56% 1595
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 87732 265 85011 1806.57 1166
global segment-length histogram

Files

Filename Size md5
ENCFF300SDH.bed.gz 2.01 MB ece6ee08648ce6c2b83fd1aa6c8a6427
ENCFF300SDH.tabix.bed.gz 940.83 KB 5be5c9d6a27c699e9bb043836588cfb0
ENCFF300SDH.tabix.bed.gz.tbi 271.5 KB 1908dea1efbf935544ec3f1648cec482
genomic_resource.yaml 1.77 KB 3eb22d86a7d6df212b5e795ff89a5671
statistics/