Resource

Id Histone_ChIP-seq/ENCSR207ABAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR207ABA [biosample_summary="Homo sapiens with basal cell carcinoma; skin epidermis tissue male adult (67 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR207ABA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001003/
  • biosample_summary: Homo sapiens with basal cell carcinoma; skin epidermis tissue male adult (67 years)
  • date_created: 2020-07-02T16:46:43.314336+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR207ABA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (67 years) with basal cell carcinoma
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR207ABA float

Histone_ChIP-seq_ENCSR207ABA
Histone_ChIP-seq ENCSR207ABA [biosample_summary="Homo sapiens with basal cell carcinoma; skin epidermis tissue male adult (67 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR207ABA [1.74, 78.9]
n
96,037,308
mean
11.4
sd
9.27

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 960373082.98% 74706
chr1 10392204 4.17% 7610
chr2 7691951 3.18% 6183
chr3 5611258 2.83% 4539
chr4 2799920 1.47% 2410
chr5 4473934 2.46% 3592
chr6 5347619 3.13% 4259
chr7 3967799 2.49% 3222
chr8 3593550 2.48% 3097
chr9 4086257 2.95% 3365
chr10 4581391 3.42% 3670
chr11 5193218 3.84% 3781
chr12 5135929 3.85% 3748
chr13 1781764 1.56% 1484
chr14 3613451 3.38% 2565
chr15 3229983 3.17% 2571
chr16 3882016 4.30% 3007
chr17 5870580 7.05% 4121
chr18 1798084 2.24% 1507
chr19 4452585 7.60% 3100
chr20 2903433 4.51% 2203
chr21 1364194 2.92% 1110
chr22 2395970 4.71% 1795
chrX 1815505 1.16% 1703
chrY 54713 0.10% 64
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 74706 220 26570 1285.54 865
global segment-length histogram

Files

Filename Size md5
ENCFF003TGC.bed.gz 1.66 MB 816402b584ef6488099a1624d692eab2
ENCFF003TGC.tabix.bed.gz 790.66 KB c572ea15ac862d7daeff5fa1c6d19ee3
ENCFF003TGC.tabix.bed.gz.tbi 241.67 KB 31c11f992d9ca8371ee533d12af851af
genomic_resource.yaml 1.86 KB e24715a2c56143063a3d03af2cfcce62
statistics/