Resource

Id Histone_ChIP-seq/ENCSR205APYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR205APY [biosample_summary="Homo sapiens spleen tissue female adult (61 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR205APY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (61 years)
  • date_created: 2021-01-28T22:01:55.000368+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR205APY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (61 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR205APY float

Histone_ChIP-seq_ENCSR205APY
Histone_ChIP-seq ENCSR205APY [biosample_summary="Homo sapiens spleen tissue female adult (61 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR205APY [1.73, 13.5]
n
21,946,196
mean
5.44
sd
2.18

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 219461960.68% 18445
chr1 1957670 0.79% 1707
chr2 1526467 0.63% 1154
chr3 782900 0.39% 643
chr4 917431 0.48% 674
chr5 1146959 0.63% 899
chr6 1265362 0.74% 979
chr7 1134851 0.71% 808
chr8 844931 0.58% 675
chr9 959724 0.69% 781
chr10 1085648 0.81% 849
chr11 1000956 0.74% 870
chr12 969557 0.73% 828
chr13 477605 0.42% 346
chr14 625974 0.58% 487
chr15 653372 0.64% 571
chr16 789497 0.87% 642
chr17 1386865 1.67% 1093
chr18 346460 0.43% 313
chr19 1398739 2.39% 1176
chr20 887042 1.38% 760
chr21 204465 0.44% 180
chr22 508327 1.00% 466
chrX 1075394 0.69% 1544
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 18445 205 30209 1189.82 752
global segment-length histogram

Files

Filename Size md5
ENCFF976UAD.bed.gz 351.59 KB 3fc3404caf569839d2d6426e412fbe81
ENCFF976UAD.tabix.bed.gz 184.77 KB fb8420d16aa4529d01ac2848dc4f65e6
ENCFF976UAD.tabix.bed.gz.tbi 88.12 KB e85d984227f3473ed08fee819b5695cf
genomic_resource.yaml 1.5 KB 4cb7d8cc8871e33b588f73098c7a508c
statistics/