Resource

Id Histone_ChIP-seq/ENCSR204TAUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR204TAU [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (51 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR204TAU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006920/
  • biosample_summary: Homo sapiens esophagus squamous epithelium tissue female adult (51 years)
  • date_created: 2017-12-06T21:19:51.188678+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR204TAU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR204TAU float

Histone_ChIP-seq_ENCSR204TAU
Histone_ChIP-seq ENCSR204TAU [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (51 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR204TAU [1.71, 56.3]
n
136,721,940
mean
12.3
sd
9.48

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1367219404.25% 80755
chr1 14632008 5.88% 8062
chr2 10595927 4.37% 6471
chr3 8805013 4.44% 5354
chr4 5219898 2.74% 3408
chr5 6175903 3.40% 3821
chr6 7580514 4.44% 4636
chr7 5760356 3.61% 3705
chr8 5142893 3.54% 3296
chr9 6296906 4.55% 3649
chr10 7147414 5.34% 4106
chr11 7137780 5.28% 3900
chr12 6902758 5.18% 3947
chr13 3061310 2.68% 1913
chr14 4871378 4.55% 2718
chr15 4786937 4.69% 2898
chr16 5174550 5.73% 3048
chr17 7678255 9.22% 4171
chr18 2478206 3.08% 1624
chr19 5850191 9.98% 3154
chr20 3976614 6.17% 2310
chr21 1720790 3.68% 1077
chr22 3356732 6.61% 1799
chrX 2369607 1.52% 1688
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 80755 210 110681 1693.05 1046
global segment-length histogram

Files

Filename Size md5
ENCFF673PCP.bed.gz 1.98 MB 1cc2579dea801fdd31c09e9bbc4e43ce
ENCFF673PCP.tabix.bed.gz 889.4 KB c989fd4826e7263b34040129a6ec0b13
ENCFF673PCP.tabix.bed.gz.tbi 239.69 KB 67c1b0584caeae32996dfae4c1613546
genomic_resource.yaml 1.78 KB de02cb9d94ca822419f242ff5fd0044e
statistics/