Resource

Id Histone_ChIP-seq/ENCSR201OSXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR201OSX [biosample_summary="Homo sapiens gastrocnemius medialis tissue female adult (53 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR201OSX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0011907/
  • biosample_summary: Homo sapiens gastrocnemius medialis tissue female adult (53 years)
  • date_created: 2017-01-24T04:35:07.360786+00:00
  • date_released: 2017-01-27
  • doi: 10.17989/ENCSR201OSX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR201OSX float

Histone_ChIP-seq_ENCSR201OSX
Histone_ChIP-seq ENCSR201OSX [biosample_summary="Homo sapiens gastrocnemius medialis tissue female adult (53 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR201OSX [1.39, 10.7]
n
33,533,889
mean
4.34
sd
1.58

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 335338891.04% 29978
chr1 3185096 1.28% 2877
chr2 1879788 0.78% 1535
chr3 1058772 0.53% 933
chr4 1298379 0.68% 988
chr5 1651791 0.91% 1342
chr6 2133171 1.25% 1601
chr7 1626224 1.02% 1299
chr8 1308209 0.90% 1181
chr9 1512520 1.09% 1371
chr10 1548201 1.16% 1317
chr11 1530359 1.13% 1377
chr12 1517862 1.14% 1360
chr13 690278 0.60% 542
chr14 948320 0.89% 800
chr15 920140 0.90% 785
chr16 1290663 1.43% 1145
chr17 2149962 2.58% 1831
chr18 600229 0.75% 511
chr19 2364422 4.03% 1949
chr20 1279177 1.98% 1137
chr21 499577 1.07% 495
chr22 1063157 2.09% 1198
chrX 1472772 0.94% 2394
chrY 4820 0.01% 10
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 29978 245 34364 1118.62 670
global segment-length histogram

Files

Filename Size md5
ENCFF723XTW.bed.gz 565.85 KB 73c5bf781b11cef64172f98eb7ac2762
ENCFF723XTW.tabix.bed.gz 295.63 KB 2ea056f66a15437b75d93b553a08881e
ENCFF723XTW.tabix.bed.gz.tbi 107.48 KB a9a08de8250753d321c396dafc1f197c
genomic_resource.yaml 1.55 KB 90bffc56df728a65562160cd1d0c518a
statistics/