Resource

Id Histone_ChIP-seq/ENCSR192IRQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR192IRQ [biosample_summary="Homo sapiens BLaER1 3 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR192IRQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 3 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:46.354260+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR192IRQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 3 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR192IRQ float

Histone_ChIP-seq_ENCSR192IRQ
Histone_ChIP-seq ENCSR192IRQ [biosample_summary="Homo sapiens BLaER1 3 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR192IRQ [1.26, 79.2]
n
82,257,848
mean
14.8
sd
13.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 822578482.56% 77760
chr1 7797569 3.13% 7347
chr1_KI270713v1_random 1629 4.00% 2
chr2 5604771 2.31% 5324
chr3 4170866 2.10% 3942
chr3_GL000221v1_random 472 0.30% 1
chr4 2796511 1.47% 2637
chr5 3772736 2.08% 3416
chr6 4138648 2.42% 3646
chr7 3994929 2.51% 3915
chr8 3237440 2.23% 3138
chr9 3647414 2.64% 3523
chr9_KI270719v1_random 254 0.14% 1
chr10 3660825 2.74% 3584
chr11 4137651 3.06% 3905
chr11_KI270721v1_random 463 0.46% 1
chr12 4023630 3.02% 3683
chr13 1721037 1.50% 1550
chr14 2876216 2.69% 2624
chr14_GL000009v2_random 606 0.30% 1
chr14_GL000194v1_random 971 0.51% 1
chr14_GL000225v1_random 1247 0.59% 3
chr15 2580046 2.53% 2549
chr15_KI270727v1_random 1465 0.33% 2
chr16 3950752 4.37% 3906
chr17 5470074 6.57% 5119
chr17_GL000205v2_random 11268 6.07% 8
chr18 1432005 1.78% 1320
chr19 5122877 8.74% 4681
chr20 2526747 3.92% 2531
chr21 1182263 2.53% 1169
chr22 2565162 5.05% 2642
chr22_KI270733v1_random 2248 1.25% 5
chrUn_GL000195v1 2371 1.30% 4
chrUn_GL000216v2 1654 0.94% 3
chrUn_GL000219v1 4546 2.54% 3
chrUn_GL000220v1 267 0.17% 1
chrUn_GL000224v1 351 0.20% 1
chrUn_KI270744v1 1827 1.08% 2
chrUn_KI270753v1 815 1.29% 2
chrX 1812666 1.16% 1564
chrY 2559 <0.01% 4
3325 contigs with no values (126074207 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 77760 250 26934 1057.84 554
global segment-length histogram

Files

Filename Size md5
ENCFF299QNY.bed.gz 1.84 MB 12ab88bf7cbc405edd7f7e0b3c4b22fc
ENCFF299QNY.tabix.bed.gz 838.99 KB 8075e6394467f4d8c36968cab75f7fe8
ENCFF299QNY.tabix.bed.gz.tbi 246.49 KB 133d1abe5581d9709b12ae60c901ed39
genomic_resource.yaml 3.11 KB b48ed6b08613c89f0bcfa20665231288
statistics/