Histone_ChIP-seq_ENCSR189QAD
Histone_ChIP-seq ENCSR189QAD [biosample_summary="Homo sapiens adrenal gland tissue female adult (53 years)" and target="H3K27ac"]
×
| Id: | Histone_ChIP-seq/ENCSR189QAD |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR189QAD [biosamplesummary="Homo sapiens adrenal gland tissue female adult (53 years)" and target="H3K27ac"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (53 years) output_type: pseudoreplicated peaks audit_internal_action: Archived analysis {ENCAN799FMG|/analyses/ENCAN799FMG/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_warning: PBC1 (PCR Bottlenecking Coefficient 1, M1/M_distinct) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where some reads map (M_distinct). A PBC1 value in the range 0 - 0.5 is severe bottlenecking, 0.5 - 0.8 is moderate bottlenecking, 0.8 - 0.9 is mild bottlenecking, and > 0.9 is no bottlenecking. PBC1 value > 0.9 is recommended, but > 0.8 is acceptable. ENCODE processed alignments file {ENCFF070MRW|/files/ENCFF070MRW/} processed by ChIP-seq ENCODE3 hg19 pipeline was generated from a library with PBC1 value of 0.90. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR189QAD | float |
Histone_ChIP-seq_ENCSR189QAD |
Histone_ChIP-seq ENCSR189QAD [biosample_summary="Homo sapiens adrenal gland tissue female adult (53 years)" and target="H3K27ac"]
|
|
[1.38, 97.4] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF257XEM.bed.gz | 2.29 MB | 02803977c6bb8ac747e0fa455a165043 |
| ENCFF257XEM.bed.gz.dvc | 101.0 B | 65deb6fd70816da0d0838f11e4bd1168 |
| ENCFF257XEM.tabix.bed.gz | 1.02 MB | 3e8703d0858216205baf7ad443558198 |
| ENCFF257XEM.tabix.bed.gz.dvc | 107.0 B | b9880e8e9e3cdd295df812be24a5be06 |
| ENCFF257XEM.tabix.bed.gz.tbi | 268.47 KB | 7515f8849cb662171409cfe617cde16a |
| ENCFF257XEM.tabix.bed.gz.tbi.dvc | 110.0 B | 439732626c1699b8f7a68a71a8cd9fe9 |
| genomic_resource.yaml | 2.15 KB | a9985975abed5f499610597a4609d321 |
| genomic_resource_original.yaml | 2.01 KB | 46e21dfc202502035e24086325b9f1d7 |
| statistics/ |