Resource

Id Histone_ChIP-seq/ENCSR185JEPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR185JEP [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR185JEP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004648/
  • biosample_summary: Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)
  • date_created: 2018-04-26T17:29:12.260369+00:00
  • date_released: 2019-07-19
  • doi: 10.17989/ENCSR185JEP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR185JEP float

Histone_ChIP-seq_ENCSR185JEP
Histone_ChIP-seq ENCSR185JEP [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR185JEP [1.63, 22.3]
n
211,529,277
mean
6.78
sd
3.05

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2115292776.57% 99313
chr1 20553107 8.26% 9258
chr2 16549438 6.83% 8361
chr3 13584836 6.85% 6844
chr4 8931007 4.70% 4903
chr5 10178845 5.61% 4925
chr6 9691294 5.67% 5092
chr7 9871045 6.19% 5117
chr8 7390922 5.09% 3961
chr9 9701302 7.01% 4455
chr10 9552393 7.14% 4589
chr11 10619173 7.86% 4535
chr12 11476788 8.61% 4939
chr13 4648171 4.06% 2705
chr14 7399243 6.91% 3439
chr15 8022812 7.87% 3738
chr16 8902794 9.85% 3367
chr17 11573325 13.90% 4672
chr18 3694822 4.60% 2132
chr19 11303250 19.28% 3903
chr20 6200715 9.62% 2575
chr21 2518374 5.39% 1047
chr22 5110977 10.06% 1925
chrX 3860625 2.47% 2663
chrY 194019 0.34% 168
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 99313 245 88823 2129.93 1071
global segment-length histogram

Files

Filename Size md5
ENCFF093UJB.bed.gz 2.24 MB d612cdb2bbfee72fedd0391cd346bd94
ENCFF093UJB.tabix.bed.gz 1.03 MB 7d13c49de4d06b82dd7203ff32ddf0f0
ENCFF093UJB.tabix.bed.gz.tbi 158.0 KB 15aa6890cbca4def2a869d3c55f17223
genomic_resource.yaml 1.55 KB 3de3b4333fd70b5d53f7f17099ee1fbc
statistics/